Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim9Q8C7M3 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim9Q8C7M3 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim9Q8C7M3 Wnt10b-206ENSMUST00000228546 2709 ntBASIC17.67■□□□□ 0.42
Trim9Q8C7M3 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim9Q8C7M3 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim9Q8C7M3 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim9Q8C7M3 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim9Q8C7M3 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Trim9Q8C7M3 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC17.66■□□□□ 0.42
Trim9Q8C7M3 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim9Q8C7M3 Prob1-201ENSMUST00000097619 3021 ntBASIC17.66■□□□□ 0.42
Trim9Q8C7M3 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trim9Q8C7M3 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Trim9Q8C7M3 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trim9Q8C7M3 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim9Q8C7M3 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim9Q8C7M3 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trim9Q8C7M3 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim9Q8C7M3 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Trim9Q8C7M3 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trim9Q8C7M3 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Trim9Q8C7M3 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim9Q8C7M3 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trim9Q8C7M3 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC17.66■□□□□ 0.42
Trim9Q8C7M3 Mir3081-201ENSMUST00000175305 84 ntBASIC17.66■□□□□ 0.42
Trim9Q8C7M3 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim9Q8C7M3 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trim9Q8C7M3 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim9Q8C7M3 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim9Q8C7M3 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trim9Q8C7M3 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC17.66■□□□□ 0.42
Trim9Q8C7M3 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Trim9Q8C7M3 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Trim9Q8C7M3 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Trim9Q8C7M3 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim9Q8C7M3 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trim9Q8C7M3 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trim9Q8C7M3 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim9Q8C7M3 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim9Q8C7M3 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trim9Q8C7M3 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Trim9Q8C7M3 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trim9Q8C7M3 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC17.65■□□□□ 0.42
Trim9Q8C7M3 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC17.65■□□□□ 0.42
Trim9Q8C7M3 Gm1818-201ENSMUST00000169406 1184 ntBASIC17.65■□□□□ 0.42
Trim9Q8C7M3 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trim9Q8C7M3 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC17.65■□□□□ 0.42
Trim9Q8C7M3 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC17.65■□□□□ 0.42
Trim9Q8C7M3 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC17.65■□□□□ 0.42
Trim9Q8C7M3 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trim9Q8C7M3 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim9Q8C7M3 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Trim9Q8C7M3 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim9Q8C7M3 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trim9Q8C7M3 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim9Q8C7M3 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim9Q8C7M3 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim9Q8C7M3 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim9Q8C7M3 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Trim9Q8C7M3 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim9Q8C7M3 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim9Q8C7M3 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trim9Q8C7M3 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim9Q8C7M3 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Trim9Q8C7M3 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Trim9Q8C7M3 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Trim9Q8C7M3 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Trim9Q8C7M3 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Trim9Q8C7M3 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Trim9Q8C7M3 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim9Q8C7M3 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Trim9Q8C7M3 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim9Q8C7M3 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Trim9Q8C7M3 Gm8349-201ENSMUST00000182720 1003 ntBASIC17.64■□□□□ 0.41
Trim9Q8C7M3 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC17.64■□□□□ 0.41
Trim9Q8C7M3 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Trim9Q8C7M3 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim9Q8C7M3 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
Trim9Q8C7M3 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Trim9Q8C7M3 App-207ENSMUST00000227737 2827 ntBASIC17.64■□□□□ 0.41
Trim9Q8C7M3 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim9Q8C7M3 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Trim9Q8C7M3 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim9Q8C7M3 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim9Q8C7M3 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim9Q8C7M3 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trim9Q8C7M3 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim9Q8C7M3 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim9Q8C7M3 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC17.63■□□□□ 0.41
Trim9Q8C7M3 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trim9Q8C7M3 Gm7284-201ENSMUST00000131667 944 ntBASIC17.63■□□□□ 0.41
Trim9Q8C7M3 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC17.63■□□□□ 0.41
Trim9Q8C7M3 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trim9Q8C7M3 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Trim9Q8C7M3 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim9Q8C7M3 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim9Q8C7M3 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC17.63■□□□□ 0.41
Trim9Q8C7M3 Otx2os1-206ENSMUST00000228153 787 ntBASIC17.63■□□□□ 0.41
Trim9Q8C7M3 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms