Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col6a6Q8C6K9 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col6a6Q8C6K9 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Col6a6Q8C6K9 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC14.39□□□□□ -0.11
Col6a6Q8C6K9 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Col6a6Q8C6K9 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC14.39□□□□□ -0.11
Col6a6Q8C6K9 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC14.39□□□□□ -0.11
Col6a6Q8C6K9 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Col6a6Q8C6K9 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Col6a6Q8C6K9 Mir6404-201ENSMUST00000183699 94 ntBASIC14.39□□□□□ -0.11
Col6a6Q8C6K9 Gm36967-201ENSMUST00000193814 266 ntBASIC14.39□□□□□ -0.11
Col6a6Q8C6K9 Gm43438-201ENSMUST00000198133 379 ntBASIC14.39□□□□□ -0.11
Col6a6Q8C6K9 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC14.39□□□□□ -0.11
Col6a6Q8C6K9 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC14.39□□□□□ -0.11
Col6a6Q8C6K9 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col6a6Q8C6K9 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
Col6a6Q8C6K9 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col6a6Q8C6K9 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col6a6Q8C6K9 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col6a6Q8C6K9 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col6a6Q8C6K9 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col6a6Q8C6K9 Gm11620-201ENSMUST00000118770 1845 ntBASIC14.39□□□□□ -0.11
Col6a6Q8C6K9 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Col6a6Q8C6K9 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col6a6Q8C6K9 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col6a6Q8C6K9 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Col6a6Q8C6K9 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col6a6Q8C6K9 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col6a6Q8C6K9 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC14.38□□□□□ -0.11
Col6a6Q8C6K9 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC14.38□□□□□ -0.11
Col6a6Q8C6K9 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col6a6Q8C6K9 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col6a6Q8C6K9 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Col6a6Q8C6K9 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col6a6Q8C6K9 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col6a6Q8C6K9 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC14.38□□□□□ -0.11
Col6a6Q8C6K9 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Col6a6Q8C6K9 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col6a6Q8C6K9 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col6a6Q8C6K9 Gm37811-201ENSMUST00000192416 2601 ntBASIC14.38□□□□□ -0.11
Col6a6Q8C6K9 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col6a6Q8C6K9 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Col6a6Q8C6K9 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Col6a6Q8C6K9 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC14.38□□□□□ -0.11
Col6a6Q8C6K9 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col6a6Q8C6K9 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC14.38□□□□□ -0.11
Col6a6Q8C6K9 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC14.38□□□□□ -0.11
Col6a6Q8C6K9 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Col6a6Q8C6K9 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col6a6Q8C6K9 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Col6a6Q8C6K9 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col6a6Q8C6K9 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Col6a6Q8C6K9 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col6a6Q8C6K9 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col6a6Q8C6K9 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col6a6Q8C6K9 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col6a6Q8C6K9 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col6a6Q8C6K9 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col6a6Q8C6K9 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Col6a6Q8C6K9 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Col6a6Q8C6K9 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col6a6Q8C6K9 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col6a6Q8C6K9 Gm27301-201ENSMUST00000184012 127 ntBASIC14.37□□□□□ -0.11
Col6a6Q8C6K9 Gm45167-201ENSMUST00000208007 322 ntBASIC14.37□□□□□ -0.11
Col6a6Q8C6K9 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col6a6Q8C6K9 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col6a6Q8C6K9 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Col6a6Q8C6K9 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Col6a6Q8C6K9 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Col6a6Q8C6K9 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col6a6Q8C6K9 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC14.37□□□□□ -0.11
Col6a6Q8C6K9 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col6a6Q8C6K9 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col6a6Q8C6K9 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col6a6Q8C6K9 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Col6a6Q8C6K9 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col6a6Q8C6K9 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col6a6Q8C6K9 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col6a6Q8C6K9 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC14.36□□□□□ -0.11
Col6a6Q8C6K9 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC14.36□□□□□ -0.11
Col6a6Q8C6K9 Gm5177-201ENSMUST00000183092 997 ntBASIC14.36□□□□□ -0.11
Col6a6Q8C6K9 AC107711.5-202ENSMUST00000226429 702 ntBASIC14.36□□□□□ -0.11
Col6a6Q8C6K9 AC155252.2-201ENSMUST00000226946 680 ntBASIC14.36□□□□□ -0.11
Col6a6Q8C6K9 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col6a6Q8C6K9 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Col6a6Q8C6K9 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC14.36□□□□□ -0.11
Col6a6Q8C6K9 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Col6a6Q8C6K9 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col6a6Q8C6K9 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Col6a6Q8C6K9 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Col6a6Q8C6K9 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC14.36□□□□□ -0.11
Col6a6Q8C6K9 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col6a6Q8C6K9 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col6a6Q8C6K9 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Col6a6Q8C6K9 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col6a6Q8C6K9 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC14.36□□□□□ -0.11
Col6a6Q8C6K9 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Col6a6Q8C6K9 Gm12892-201ENSMUST00000117367 1146 ntBASIC14.36□□□□□ -0.11
Col6a6Q8C6K9 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col6a6Q8C6K9 Gm8825-201ENSMUST00000182565 998 ntBASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms