Protein–RNA interactions for Protein: Q8C190

Vps9d1, VPS9 domain-containing protein 1, mousemouse

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps9d1Q8C190 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC15.03■□□□□ -0
Vps9d1Q8C190 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC15.03■□□□□ -0
Vps9d1Q8C190 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC15.03■□□□□ -0
Vps9d1Q8C190 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Vps9d1Q8C190 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Vps9d1Q8C190 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Vps9d1Q8C190 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC15.03■□□□□ -0
Vps9d1Q8C190 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC15.03■□□□□ -0
Vps9d1Q8C190 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC15.03■□□□□ -0
Vps9d1Q8C190 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC15.03■□□□□ -0
Vps9d1Q8C190 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Vps9d1Q8C190 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Vps9d1Q8C190 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Vps9d1Q8C190 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Vps9d1Q8C190 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Vps9d1Q8C190 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Vps9d1Q8C190 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC15.02■□□□□ -0
Vps9d1Q8C190 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Vps9d1Q8C190 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Vps9d1Q8C190 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC15.02■□□□□ -0
Vps9d1Q8C190 Gm13474-201ENSMUST00000122466 815 ntBASIC15.02■□□□□ -0
Vps9d1Q8C190 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC15.02■□□□□ -0
Vps9d1Q8C190 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC15.02■□□□□ -0
Vps9d1Q8C190 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC15.02■□□□□ -0
Vps9d1Q8C190 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Vps9d1Q8C190 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Vps9d1Q8C190 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Vps9d1Q8C190 Slc35b2-202ENSMUST00000223987 1766 ntBASIC15.02□□□□□ -0.01
Vps9d1Q8C190 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Vps9d1Q8C190 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
Vps9d1Q8C190 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Vps9d1Q8C190 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Vps9d1Q8C190 AC153526.5-201ENSMUST00000218661 2147 ntBASIC15.02□□□□□ -0.01
Vps9d1Q8C190 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Vps9d1Q8C190 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Vps9d1Q8C190 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Vps9d1Q8C190 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Vps9d1Q8C190 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Vps9d1Q8C190 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC15.02□□□□□ -0.01
Vps9d1Q8C190 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Vps9d1Q8C190 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Vps9d1Q8C190 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Vps9d1Q8C190 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Vps9d1Q8C190 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vps9d1Q8C190 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Vps9d1Q8C190 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Vps9d1Q8C190 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Vps9d1Q8C190 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Vps9d1Q8C190 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vps9d1Q8C190 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vps9d1Q8C190 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vps9d1Q8C190 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC15.01□□□□□ -0.01
Vps9d1Q8C190 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vps9d1Q8C190 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Vps9d1Q8C190 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Vps9d1Q8C190 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vps9d1Q8C190 Gm43353-201ENSMUST00000199224 1295 ntBASIC15.01□□□□□ -0.01
Vps9d1Q8C190 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC15.01□□□□□ -0.01
Vps9d1Q8C190 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vps9d1Q8C190 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC15.01□□□□□ -0.01
Vps9d1Q8C190 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Vps9d1Q8C190 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vps9d1Q8C190 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vps9d1Q8C190 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vps9d1Q8C190 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC15.01□□□□□ -0.01
Vps9d1Q8C190 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vps9d1Q8C190 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC15.01□□□□□ -0.01
Vps9d1Q8C190 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vps9d1Q8C190 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vps9d1Q8C190 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC15.01□□□□□ -0.01
Vps9d1Q8C190 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vps9d1Q8C190 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Vps9d1Q8C190 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Vps9d1Q8C190 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Vps9d1Q8C190 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC15□□□□□ -0.01
Vps9d1Q8C190 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Vps9d1Q8C190 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Vps9d1Q8C190 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Vps9d1Q8C190 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Vps9d1Q8C190 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Vps9d1Q8C190 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC15□□□□□ -0.01
Vps9d1Q8C190 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC15□□□□□ -0.01
Vps9d1Q8C190 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC15□□□□□ -0.01
Vps9d1Q8C190 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC15□□□□□ -0.01
Vps9d1Q8C190 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC15□□□□□ -0.01
Vps9d1Q8C190 AC159205.3-201ENSMUST00000224614 874 ntBASIC15□□□□□ -0.01
Vps9d1Q8C190 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC15□□□□□ -0.01
Vps9d1Q8C190 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Vps9d1Q8C190 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC15□□□□□ -0.01
Vps9d1Q8C190 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
Vps9d1Q8C190 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Vps9d1Q8C190 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Vps9d1Q8C190 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Vps9d1Q8C190 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Vps9d1Q8C190 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC15□□□□□ -0.01
Vps9d1Q8C190 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Vps9d1Q8C190 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Vps9d1Q8C190 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Vps9d1Q8C190 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Vps9d1Q8C190 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 69.7 ms