Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Sh3rf2Q8BZT2 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sh3rf2Q8BZT2 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sh3rf2Q8BZT2 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Sh3rf2Q8BZT2 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Sh3rf2Q8BZT2 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sh3rf2Q8BZT2 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Sh3rf2Q8BZT2 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC16.21■□□□□ 0.19
Sh3rf2Q8BZT2 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC16.21■□□□□ 0.18
Sh3rf2Q8BZT2 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.18
Sh3rf2Q8BZT2 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
Sh3rf2Q8BZT2 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sh3rf2Q8BZT2 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sh3rf2Q8BZT2 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Sh3rf2Q8BZT2 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Sh3rf2Q8BZT2 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sh3rf2Q8BZT2 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Sh3rf2Q8BZT2 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sh3rf2Q8BZT2 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sh3rf2Q8BZT2 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sh3rf2Q8BZT2 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Sh3rf2Q8BZT2 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC16.2■□□□□ 0.18
Sh3rf2Q8BZT2 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sh3rf2Q8BZT2 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC16.2■□□□□ 0.18
Sh3rf2Q8BZT2 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sh3rf2Q8BZT2 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sh3rf2Q8BZT2 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sh3rf2Q8BZT2 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sh3rf2Q8BZT2 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sh3rf2Q8BZT2 Gm3928-201ENSMUST00000121141 1307 ntBASIC16.19■□□□□ 0.18
Sh3rf2Q8BZT2 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Sh3rf2Q8BZT2 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sh3rf2Q8BZT2 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sh3rf2Q8BZT2 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sh3rf2Q8BZT2 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sh3rf2Q8BZT2 Gm45774-201ENSMUST00000211992 2665 ntBASIC16.19■□□□□ 0.18
Sh3rf2Q8BZT2 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Sh3rf2Q8BZT2 Gm7222-201ENSMUST00000117512 906 ntBASIC16.19■□□□□ 0.18
Sh3rf2Q8BZT2 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC16.19■□□□□ 0.18
Sh3rf2Q8BZT2 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC16.19■□□□□ 0.18
Sh3rf2Q8BZT2 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC16.19■□□□□ 0.18
Sh3rf2Q8BZT2 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC16.19■□□□□ 0.18
Sh3rf2Q8BZT2 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sh3rf2Q8BZT2 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC16.19■□□□□ 0.18
Sh3rf2Q8BZT2 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC16.19■□□□□ 0.18
Sh3rf2Q8BZT2 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sh3rf2Q8BZT2 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sh3rf2Q8BZT2 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sh3rf2Q8BZT2 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sh3rf2Q8BZT2 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sh3rf2Q8BZT2 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sh3rf2Q8BZT2 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC16.19■□□□□ 0.18
Sh3rf2Q8BZT2 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sh3rf2Q8BZT2 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sh3rf2Q8BZT2 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sh3rf2Q8BZT2 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sh3rf2Q8BZT2 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sh3rf2Q8BZT2 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sh3rf2Q8BZT2 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sh3rf2Q8BZT2 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC16.18■□□□□ 0.18
Sh3rf2Q8BZT2 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sh3rf2Q8BZT2 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sh3rf2Q8BZT2 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
Sh3rf2Q8BZT2 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sh3rf2Q8BZT2 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC16.18■□□□□ 0.18
Sh3rf2Q8BZT2 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC16.18■□□□□ 0.18
Sh3rf2Q8BZT2 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Sh3rf2Q8BZT2 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sh3rf2Q8BZT2 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sh3rf2Q8BZT2 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC16.18■□□□□ 0.18
Sh3rf2Q8BZT2 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC16.18■□□□□ 0.18
Sh3rf2Q8BZT2 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sh3rf2Q8BZT2 Gm8784-201ENSMUST00000222096 1435 ntBASIC16.18■□□□□ 0.18
Sh3rf2Q8BZT2 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sh3rf2Q8BZT2 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Sh3rf2Q8BZT2 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC16.18■□□□□ 0.18
Sh3rf2Q8BZT2 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Sh3rf2Q8BZT2 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Sh3rf2Q8BZT2 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sh3rf2Q8BZT2 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Sh3rf2Q8BZT2 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sh3rf2Q8BZT2 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sh3rf2Q8BZT2 Gm6184-201ENSMUST00000120403 1261 ntBASIC16.17■□□□□ 0.18
Sh3rf2Q8BZT2 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC16.17■□□□□ 0.18
Sh3rf2Q8BZT2 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Sh3rf2Q8BZT2 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sh3rf2Q8BZT2 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Sh3rf2Q8BZT2 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Sh3rf2Q8BZT2 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC16.17■□□□□ 0.18
Sh3rf2Q8BZT2 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC16.17■□□□□ 0.18
Sh3rf2Q8BZT2 Psmb5-202ENSMUST00000227257 622 ntBASIC16.17■□□□□ 0.18
Sh3rf2Q8BZT2 AC117588.1-201ENSMUST00000228510 999 ntBASIC16.17■□□□□ 0.18
Sh3rf2Q8BZT2 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sh3rf2Q8BZT2 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sh3rf2Q8BZT2 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sh3rf2Q8BZT2 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sh3rf2Q8BZT2 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sh3rf2Q8BZT2 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sh3rf2Q8BZT2 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sh3rf2Q8BZT2 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms