Protein–RNA interactions for Protein: Q8BVL3

Snx17, Sorting nexin-17, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx17Q8BVL3 Gm6316-201ENSMUST00000082064 1020 ntBASIC17.71■□□□□ 0.43
Snx17Q8BVL3 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Snx17Q8BVL3 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Snx17Q8BVL3 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Snx17Q8BVL3 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Snx17Q8BVL3 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Snx17Q8BVL3 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC17.71■□□□□ 0.42
Snx17Q8BVL3 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC17.71■□□□□ 0.42
Snx17Q8BVL3 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Snx17Q8BVL3 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Snx17Q8BVL3 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Snx17Q8BVL3 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Snx17Q8BVL3 Gm13597-201ENSMUST00000121239 375 ntBASIC17.7■□□□□ 0.42
Snx17Q8BVL3 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Snx17Q8BVL3 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC17.7■□□□□ 0.42
Snx17Q8BVL3 Mir7023-201ENSMUST00000185093 64 ntBASIC17.7■□□□□ 0.42
Snx17Q8BVL3 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC17.7■□□□□ 0.42
Snx17Q8BVL3 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Snx17Q8BVL3 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Snx17Q8BVL3 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Snx17Q8BVL3 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Snx17Q8BVL3 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Snx17Q8BVL3 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Snx17Q8BVL3 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Snx17Q8BVL3 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Snx17Q8BVL3 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Snx17Q8BVL3 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
Snx17Q8BVL3 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Snx17Q8BVL3 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Snx17Q8BVL3 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Snx17Q8BVL3 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Snx17Q8BVL3 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
Snx17Q8BVL3 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Snx17Q8BVL3 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Snx17Q8BVL3 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Snx17Q8BVL3 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Snx17Q8BVL3 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Snx17Q8BVL3 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Snx17Q8BVL3 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Snx17Q8BVL3 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Snx17Q8BVL3 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC17.69■□□□□ 0.42
Snx17Q8BVL3 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC17.69■□□□□ 0.42
Snx17Q8BVL3 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Snx17Q8BVL3 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Snx17Q8BVL3 AC155252.2-201ENSMUST00000226946 680 ntBASIC17.69■□□□□ 0.42
Snx17Q8BVL3 AC117588.1-201ENSMUST00000228510 999 ntBASIC17.69■□□□□ 0.42
Snx17Q8BVL3 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Snx17Q8BVL3 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Snx17Q8BVL3 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Snx17Q8BVL3 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Snx17Q8BVL3 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Snx17Q8BVL3 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Snx17Q8BVL3 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Snx17Q8BVL3 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Snx17Q8BVL3 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Snx17Q8BVL3 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Snx17Q8BVL3 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Snx17Q8BVL3 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC17.68■□□□□ 0.42
Snx17Q8BVL3 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Snx17Q8BVL3 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Snx17Q8BVL3 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Snx17Q8BVL3 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC17.68■□□□□ 0.42
Snx17Q8BVL3 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Snx17Q8BVL3 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Snx17Q8BVL3 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Snx17Q8BVL3 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Snx17Q8BVL3 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Snx17Q8BVL3 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Snx17Q8BVL3 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Snx17Q8BVL3 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC17.68■□□□□ 0.42
Snx17Q8BVL3 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Snx17Q8BVL3 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Snx17Q8BVL3 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Snx17Q8BVL3 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Snx17Q8BVL3 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
Snx17Q8BVL3 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Snx17Q8BVL3 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Snx17Q8BVL3 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Snx17Q8BVL3 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Snx17Q8BVL3 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Snx17Q8BVL3 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Snx17Q8BVL3 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Snx17Q8BVL3 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Snx17Q8BVL3 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC17.67■□□□□ 0.42
Snx17Q8BVL3 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Snx17Q8BVL3 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC17.67■□□□□ 0.42
Snx17Q8BVL3 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Snx17Q8BVL3 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Snx17Q8BVL3 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC17.67■□□□□ 0.42
Snx17Q8BVL3 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Snx17Q8BVL3 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Snx17Q8BVL3 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Snx17Q8BVL3 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Snx17Q8BVL3 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Snx17Q8BVL3 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Snx17Q8BVL3 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Snx17Q8BVL3 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Snx17Q8BVL3 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Snx17Q8BVL3 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Snx17Q8BVL3 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms