Protein–RNA interactions for Protein: Q8BPK2

Zcchc3, Zinc finger, CCHC domain-containing 3, mousemouse

Known RBP Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zcchc3Q8BPK2 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC15.08■□□□□ 0
Zcchc3Q8BPK2 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Zcchc3Q8BPK2 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Zcchc3Q8BPK2 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Zcchc3Q8BPK2 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Zcchc3Q8BPK2 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC15.08■□□□□ 0
Zcchc3Q8BPK2 Zkscan4-202ENSMUST00000225845 1506 ntBASIC15.07■□□□□ 0
Zcchc3Q8BPK2 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Zcchc3Q8BPK2 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Zcchc3Q8BPK2 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Zcchc3Q8BPK2 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Zcchc3Q8BPK2 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Zcchc3Q8BPK2 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Zcchc3Q8BPK2 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Zcchc3Q8BPK2 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC15.07■□□□□ 0
Zcchc3Q8BPK2 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Zcchc3Q8BPK2 Gm44430-201ENSMUST00000203376 995 ntBASIC15.07■□□□□ 0
Zcchc3Q8BPK2 AC121577.1-201ENSMUST00000227302 707 ntBASIC15.07■□□□□ 0
Zcchc3Q8BPK2 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Zcchc3Q8BPK2 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC15.07■□□□□ 0
Zcchc3Q8BPK2 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Zcchc3Q8BPK2 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Zcchc3Q8BPK2 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
Zcchc3Q8BPK2 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Zcchc3Q8BPK2 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Zcchc3Q8BPK2 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Zcchc3Q8BPK2 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Zcchc3Q8BPK2 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC15.06■□□□□ 0
Zcchc3Q8BPK2 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Zcchc3Q8BPK2 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Zcchc3Q8BPK2 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Zcchc3Q8BPK2 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Zcchc3Q8BPK2 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Zcchc3Q8BPK2 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Zcchc3Q8BPK2 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Zcchc3Q8BPK2 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
Zcchc3Q8BPK2 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
Zcchc3Q8BPK2 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Zcchc3Q8BPK2 Gm6623-201ENSMUST00000173570 544 ntBASIC15.06■□□□□ 0
Zcchc3Q8BPK2 Mir7071-201ENSMUST00000184847 69 ntBASIC15.06■□□□□ 0
Zcchc3Q8BPK2 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Zcchc3Q8BPK2 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Zcchc3Q8BPK2 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Zcchc3Q8BPK2 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Zcchc3Q8BPK2 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Zcchc3Q8BPK2 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Zcchc3Q8BPK2 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Zcchc3Q8BPK2 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC15.06■□□□□ 0
Zcchc3Q8BPK2 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Zcchc3Q8BPK2 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Zcchc3Q8BPK2 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Zcchc3Q8BPK2 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Zcchc3Q8BPK2 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC15.05■□□□□ 0
Zcchc3Q8BPK2 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Zcchc3Q8BPK2 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Zcchc3Q8BPK2 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC15.05■□□□□ -0
Zcchc3Q8BPK2 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Zcchc3Q8BPK2 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Zcchc3Q8BPK2 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
Zcchc3Q8BPK2 Gm5587-201ENSMUST00000206270 674 ntBASIC15.05■□□□□ -0
Zcchc3Q8BPK2 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Zcchc3Q8BPK2 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC15.05■□□□□ -0
Zcchc3Q8BPK2 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Zcchc3Q8BPK2 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Zcchc3Q8BPK2 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Zcchc3Q8BPK2 Gm9889-202ENSMUST00000206983 1577 ntBASIC15.05■□□□□ -0
Zcchc3Q8BPK2 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Zcchc3Q8BPK2 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC15.05■□□□□ -0
Zcchc3Q8BPK2 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC15.05■□□□□ -0
Zcchc3Q8BPK2 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC15.05■□□□□ -0
Zcchc3Q8BPK2 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC15.05■□□□□ -0
Zcchc3Q8BPK2 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Zcchc3Q8BPK2 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Zcchc3Q8BPK2 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Zcchc3Q8BPK2 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Zcchc3Q8BPK2 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Zcchc3Q8BPK2 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
Zcchc3Q8BPK2 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Zcchc3Q8BPK2 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Zcchc3Q8BPK2 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
Zcchc3Q8BPK2 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Zcchc3Q8BPK2 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Zcchc3Q8BPK2 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Zcchc3Q8BPK2 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Zcchc3Q8BPK2 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Zcchc3Q8BPK2 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Zcchc3Q8BPK2 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Zcchc3Q8BPK2 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC15.04■□□□□ -0
Zcchc3Q8BPK2 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Zcchc3Q8BPK2 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC15.04■□□□□ -0
Zcchc3Q8BPK2 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Zcchc3Q8BPK2 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Zcchc3Q8BPK2 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Zcchc3Q8BPK2 Ntrk2-205ENSMUST00000224402 2284 ntBASIC15.04■□□□□ -0
Zcchc3Q8BPK2 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Zcchc3Q8BPK2 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Zcchc3Q8BPK2 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC15.04■□□□□ -0
Zcchc3Q8BPK2 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Zcchc3Q8BPK2 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Zcchc3Q8BPK2 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC15.03■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 53.6 ms