Protein–RNA interactions for Protein: Q8BLA8

Trpa1, Transient receptor potential cation channel subfamily A member 1, mousemouse

Predictions only

Length 1,125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpa1Q8BLA8 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trpa1Q8BLA8 Gm7729-201ENSMUST00000050143 801 ntBASIC16.84■□□□□ 0.29
Trpa1Q8BLA8 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trpa1Q8BLA8 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Trpa1Q8BLA8 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Trpa1Q8BLA8 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trpa1Q8BLA8 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
Trpa1Q8BLA8 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trpa1Q8BLA8 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trpa1Q8BLA8 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trpa1Q8BLA8 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Trpa1Q8BLA8 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Trpa1Q8BLA8 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Trpa1Q8BLA8 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trpa1Q8BLA8 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Trpa1Q8BLA8 Gm9103-201ENSMUST00000119371 405 ntBASIC16.83■□□□□ 0.28
Trpa1Q8BLA8 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC16.83■□□□□ 0.28
Trpa1Q8BLA8 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trpa1Q8BLA8 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC16.83■□□□□ 0.28
Trpa1Q8BLA8 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trpa1Q8BLA8 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trpa1Q8BLA8 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trpa1Q8BLA8 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trpa1Q8BLA8 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trpa1Q8BLA8 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trpa1Q8BLA8 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Trpa1Q8BLA8 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trpa1Q8BLA8 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Trpa1Q8BLA8 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trpa1Q8BLA8 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trpa1Q8BLA8 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trpa1Q8BLA8 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trpa1Q8BLA8 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trpa1Q8BLA8 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trpa1Q8BLA8 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trpa1Q8BLA8 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trpa1Q8BLA8 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trpa1Q8BLA8 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Trpa1Q8BLA8 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trpa1Q8BLA8 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trpa1Q8BLA8 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trpa1Q8BLA8 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Trpa1Q8BLA8 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Trpa1Q8BLA8 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC16.82■□□□□ 0.28
Trpa1Q8BLA8 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trpa1Q8BLA8 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC16.82■□□□□ 0.28
Trpa1Q8BLA8 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trpa1Q8BLA8 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trpa1Q8BLA8 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trpa1Q8BLA8 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Trpa1Q8BLA8 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trpa1Q8BLA8 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Trpa1Q8BLA8 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trpa1Q8BLA8 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trpa1Q8BLA8 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trpa1Q8BLA8 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trpa1Q8BLA8 Gm16011-201ENSMUST00000121567 2662 ntBASIC16.81■□□□□ 0.28
Trpa1Q8BLA8 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trpa1Q8BLA8 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC16.81■□□□□ 0.28
Trpa1Q8BLA8 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trpa1Q8BLA8 Gm27357-201ENSMUST00000183754 135 ntBASIC16.81■□□□□ 0.28
Trpa1Q8BLA8 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trpa1Q8BLA8 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trpa1Q8BLA8 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trpa1Q8BLA8 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trpa1Q8BLA8 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trpa1Q8BLA8 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Trpa1Q8BLA8 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trpa1Q8BLA8 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trpa1Q8BLA8 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trpa1Q8BLA8 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Trpa1Q8BLA8 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trpa1Q8BLA8 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trpa1Q8BLA8 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trpa1Q8BLA8 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trpa1Q8BLA8 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trpa1Q8BLA8 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trpa1Q8BLA8 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trpa1Q8BLA8 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trpa1Q8BLA8 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trpa1Q8BLA8 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC16.8■□□□□ 0.28
Trpa1Q8BLA8 Gm44430-201ENSMUST00000203376 995 ntBASIC16.8■□□□□ 0.28
Trpa1Q8BLA8 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trpa1Q8BLA8 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trpa1Q8BLA8 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trpa1Q8BLA8 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trpa1Q8BLA8 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trpa1Q8BLA8 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trpa1Q8BLA8 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trpa1Q8BLA8 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trpa1Q8BLA8 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trpa1Q8BLA8 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trpa1Q8BLA8 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trpa1Q8BLA8 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC16.8■□□□□ 0.28
Trpa1Q8BLA8 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trpa1Q8BLA8 AC133083.1-201ENSMUST00000221736 2209 ntBASIC16.8■□□□□ 0.28
Trpa1Q8BLA8 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC16.8■□□□□ 0.28
Trpa1Q8BLA8 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trpa1Q8BLA8 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Trpa1Q8BLA8 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 75.7 ms