Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Chmp2bQ8BJF9 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Chmp2bQ8BJF9 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Chmp2bQ8BJF9 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Chmp2bQ8BJF9 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Chmp2bQ8BJF9 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Chmp2bQ8BJF9 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Chmp2bQ8BJF9 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Chmp2bQ8BJF9 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC16.43■□□□□ 0.22
Chmp2bQ8BJF9 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Chmp2bQ8BJF9 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Chmp2bQ8BJF9 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Chmp2bQ8BJF9 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Chmp2bQ8BJF9 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Chmp2bQ8BJF9 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Chmp2bQ8BJF9 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Chmp2bQ8BJF9 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Chmp2bQ8BJF9 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Chmp2bQ8BJF9 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Chmp2bQ8BJF9 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC16.42■□□□□ 0.22
Chmp2bQ8BJF9 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Chmp2bQ8BJF9 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Chmp2bQ8BJF9 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
Chmp2bQ8BJF9 Gm15442-201ENSMUST00000117905 1527 ntBASIC16.42■□□□□ 0.22
Chmp2bQ8BJF9 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Chmp2bQ8BJF9 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC16.42■□□□□ 0.22
Chmp2bQ8BJF9 Gm13436-201ENSMUST00000120418 567 ntBASIC16.42■□□□□ 0.22
Chmp2bQ8BJF9 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Chmp2bQ8BJF9 Gm37055-201ENSMUST00000191866 133 ntBASIC16.42■□□□□ 0.22
Chmp2bQ8BJF9 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC16.42■□□□□ 0.22
Chmp2bQ8BJF9 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Chmp2bQ8BJF9 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Chmp2bQ8BJF9 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Chmp2bQ8BJF9 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Chmp2bQ8BJF9 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Chmp2bQ8BJF9 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Chmp2bQ8BJF9 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Chmp2bQ8BJF9 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Chmp2bQ8BJF9 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Chmp2bQ8BJF9 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Chmp2bQ8BJF9 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC16.41■□□□□ 0.22
Chmp2bQ8BJF9 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Chmp2bQ8BJF9 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Chmp2bQ8BJF9 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
Chmp2bQ8BJF9 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Chmp2bQ8BJF9 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
Chmp2bQ8BJF9 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC16.41■□□□□ 0.22
Chmp2bQ8BJF9 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Chmp2bQ8BJF9 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Chmp2bQ8BJF9 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Chmp2bQ8BJF9 App-207ENSMUST00000227737 2827 ntBASIC16.41■□□□□ 0.22
Chmp2bQ8BJF9 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
Chmp2bQ8BJF9 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC16.41■□□□□ 0.22
Chmp2bQ8BJF9 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC16.41■□□□□ 0.22
Chmp2bQ8BJF9 Gm20472-201ENSMUST00000174403 1240 ntBASIC16.41■□□□□ 0.22
Chmp2bQ8BJF9 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Chmp2bQ8BJF9 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC16.41■□□□□ 0.22
Chmp2bQ8BJF9 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC16.41■□□□□ 0.22
Chmp2bQ8BJF9 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Chmp2bQ8BJF9 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Chmp2bQ8BJF9 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Chmp2bQ8BJF9 Ccdc166-201ENSMUST00000182172 2584 ntBASIC16.41■□□□□ 0.22
Chmp2bQ8BJF9 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Chmp2bQ8BJF9 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
Chmp2bQ8BJF9 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Chmp2bQ8BJF9 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Chmp2bQ8BJF9 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Chmp2bQ8BJF9 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Chmp2bQ8BJF9 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Chmp2bQ8BJF9 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC16.41■□□□□ 0.22
Chmp2bQ8BJF9 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Chmp2bQ8BJF9 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC16.41■□□□□ 0.22
Chmp2bQ8BJF9 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Chmp2bQ8BJF9 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Chmp2bQ8BJF9 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
Chmp2bQ8BJF9 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Chmp2bQ8BJF9 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC16.4■□□□□ 0.22
Chmp2bQ8BJF9 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Chmp2bQ8BJF9 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Chmp2bQ8BJF9 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Chmp2bQ8BJF9 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Chmp2bQ8BJF9 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Chmp2bQ8BJF9 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Chmp2bQ8BJF9 Gm29707-201ENSMUST00000196325 491 ntBASIC16.4■□□□□ 0.22
Chmp2bQ8BJF9 AL672049.1-201ENSMUST00000197943 91 ntBASIC16.4■□□□□ 0.22
Chmp2bQ8BJF9 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC16.4■□□□□ 0.22
Chmp2bQ8BJF9 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Chmp2bQ8BJF9 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Chmp2bQ8BJF9 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Chmp2bQ8BJF9 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Chmp2bQ8BJF9 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC16.4■□□□□ 0.22
Chmp2bQ8BJF9 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Chmp2bQ8BJF9 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Chmp2bQ8BJF9 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Chmp2bQ8BJF9 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Chmp2bQ8BJF9 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Chmp2bQ8BJF9 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Chmp2bQ8BJF9 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Chmp2bQ8BJF9 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Chmp2bQ8BJF9 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms