Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rnf38Q8BI21 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Rnf38Q8BI21 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC15.48■□□□□ 0.07
Rnf38Q8BI21 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rnf38Q8BI21 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Rnf38Q8BI21 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Rnf38Q8BI21 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rnf38Q8BI21 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC15.48■□□□□ 0.07
Rnf38Q8BI21 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC15.48■□□□□ 0.07
Rnf38Q8BI21 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Rnf38Q8BI21 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rnf38Q8BI21 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC15.48■□□□□ 0.07
Rnf38Q8BI21 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rnf38Q8BI21 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Rnf38Q8BI21 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Rnf38Q8BI21 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC15.48■□□□□ 0.07
Rnf38Q8BI21 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rnf38Q8BI21 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rnf38Q8BI21 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Rnf38Q8BI21 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rnf38Q8BI21 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rnf38Q8BI21 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Rnf38Q8BI21 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rnf38Q8BI21 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Rnf38Q8BI21 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Rnf38Q8BI21 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rnf38Q8BI21 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rnf38Q8BI21 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rnf38Q8BI21 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rnf38Q8BI21 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Rnf38Q8BI21 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rnf38Q8BI21 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rnf38Q8BI21 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rnf38Q8BI21 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rnf38Q8BI21 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Rnf38Q8BI21 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rnf38Q8BI21 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rnf38Q8BI21 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC15.47■□□□□ 0.07
Rnf38Q8BI21 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC15.47■□□□□ 0.07
Rnf38Q8BI21 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
Rnf38Q8BI21 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rnf38Q8BI21 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rnf38Q8BI21 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Rnf38Q8BI21 Gm6433-201ENSMUST00000118634 875 ntBASIC15.47■□□□□ 0.07
Rnf38Q8BI21 Gm8668-201ENSMUST00000120559 1447 ntBASIC15.47■□□□□ 0.07
Rnf38Q8BI21 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC15.47■□□□□ 0.07
Rnf38Q8BI21 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC15.47■□□□□ 0.07
Rnf38Q8BI21 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC15.47■□□□□ 0.07
Rnf38Q8BI21 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC15.47■□□□□ 0.07
Rnf38Q8BI21 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rnf38Q8BI21 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rnf38Q8BI21 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rnf38Q8BI21 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rnf38Q8BI21 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Rnf38Q8BI21 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rnf38Q8BI21 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rnf38Q8BI21 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
Rnf38Q8BI21 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Rnf38Q8BI21 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rnf38Q8BI21 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rnf38Q8BI21 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rnf38Q8BI21 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rnf38Q8BI21 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rnf38Q8BI21 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rnf38Q8BI21 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rnf38Q8BI21 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rnf38Q8BI21 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rnf38Q8BI21 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Rnf38Q8BI21 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Rnf38Q8BI21 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rnf38Q8BI21 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rnf38Q8BI21 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Rnf38Q8BI21 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Rnf38Q8BI21 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Rnf38Q8BI21 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rnf38Q8BI21 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC15.46■□□□□ 0.07
Rnf38Q8BI21 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rnf38Q8BI21 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Rnf38Q8BI21 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC15.46■□□□□ 0.07
Rnf38Q8BI21 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rnf38Q8BI21 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Rnf38Q8BI21 Gm16061-201ENSMUST00000122167 857 ntBASIC15.46■□□□□ 0.07
Rnf38Q8BI21 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Rnf38Q8BI21 Gm7889-201ENSMUST00000185591 958 ntBASIC15.46■□□□□ 0.07
Rnf38Q8BI21 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC15.46■□□□□ 0.07
Rnf38Q8BI21 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rnf38Q8BI21 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Rnf38Q8BI21 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC15.46■□□□□ 0.07
Rnf38Q8BI21 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rnf38Q8BI21 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rnf38Q8BI21 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
Rnf38Q8BI21 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rnf38Q8BI21 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rnf38Q8BI21 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Rnf38Q8BI21 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Rnf38Q8BI21 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rnf38Q8BI21 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rnf38Q8BI21 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Rnf38Q8BI21 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rnf38Q8BI21 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms