Protein–RNA interactions for Protein: Q8BH88

Depdc1b, DEP domain-containing protein 1B, mousemouse

Predictions only

Length 529 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1bQ8BH88 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Depdc1bQ8BH88 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Depdc1bQ8BH88 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Depdc1bQ8BH88 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC17.42■□□□□ 0.38
Depdc1bQ8BH88 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Depdc1bQ8BH88 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Depdc1bQ8BH88 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Depdc1bQ8BH88 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Depdc1bQ8BH88 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Depdc1bQ8BH88 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Depdc1bQ8BH88 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Depdc1bQ8BH88 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Depdc1bQ8BH88 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Depdc1bQ8BH88 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Depdc1bQ8BH88 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Depdc1bQ8BH88 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Depdc1bQ8BH88 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC17.41■□□□□ 0.38
Depdc1bQ8BH88 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Depdc1bQ8BH88 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC17.41■□□□□ 0.38
Depdc1bQ8BH88 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Depdc1bQ8BH88 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Depdc1bQ8BH88 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Depdc1bQ8BH88 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
Depdc1bQ8BH88 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Depdc1bQ8BH88 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Depdc1bQ8BH88 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Depdc1bQ8BH88 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Depdc1bQ8BH88 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC17.41■□□□□ 0.38
Depdc1bQ8BH88 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Depdc1bQ8BH88 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Depdc1bQ8BH88 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Depdc1bQ8BH88 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Depdc1bQ8BH88 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Depdc1bQ8BH88 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Depdc1bQ8BH88 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Depdc1bQ8BH88 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC17.41■□□□□ 0.38
Depdc1bQ8BH88 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Depdc1bQ8BH88 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Depdc1bQ8BH88 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Depdc1bQ8BH88 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Depdc1bQ8BH88 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
Depdc1bQ8BH88 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Depdc1bQ8BH88 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Depdc1bQ8BH88 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Depdc1bQ8BH88 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Depdc1bQ8BH88 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Depdc1bQ8BH88 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Depdc1bQ8BH88 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Depdc1bQ8BH88 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Depdc1bQ8BH88 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
Depdc1bQ8BH88 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Depdc1bQ8BH88 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Depdc1bQ8BH88 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Depdc1bQ8BH88 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Depdc1bQ8BH88 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
Depdc1bQ8BH88 Gm7153-201ENSMUST00000117092 455 ntBASIC17.4■□□□□ 0.38
Depdc1bQ8BH88 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Depdc1bQ8BH88 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Depdc1bQ8BH88 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Depdc1bQ8BH88 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
Depdc1bQ8BH88 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Depdc1bQ8BH88 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
Depdc1bQ8BH88 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Depdc1bQ8BH88 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Depdc1bQ8BH88 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Depdc1bQ8BH88 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC17.4■□□□□ 0.38
Depdc1bQ8BH88 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Depdc1bQ8BH88 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Depdc1bQ8BH88 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Depdc1bQ8BH88 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Depdc1bQ8BH88 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Depdc1bQ8BH88 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Depdc1bQ8BH88 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Depdc1bQ8BH88 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Depdc1bQ8BH88 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Depdc1bQ8BH88 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Depdc1bQ8BH88 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Depdc1bQ8BH88 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC17.39■□□□□ 0.37
Depdc1bQ8BH88 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC17.39■□□□□ 0.37
Depdc1bQ8BH88 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Depdc1bQ8BH88 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Depdc1bQ8BH88 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Depdc1bQ8BH88 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Depdc1bQ8BH88 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Depdc1bQ8BH88 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Depdc1bQ8BH88 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Depdc1bQ8BH88 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Depdc1bQ8BH88 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Depdc1bQ8BH88 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Depdc1bQ8BH88 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Depdc1bQ8BH88 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Depdc1bQ8BH88 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Depdc1bQ8BH88 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Depdc1bQ8BH88 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Depdc1bQ8BH88 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Depdc1bQ8BH88 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Depdc1bQ8BH88 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Depdc1bQ8BH88 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Depdc1bQ8BH88 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC17.38■□□□□ 0.37
Depdc1bQ8BH88 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms