Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Gm715-201ENSMUST00000117865 831 ntBASIC17.02■□□□□ 0.32
Trim6Q8BGE7 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC17.02■□□□□ 0.32
Trim6Q8BGE7 Arhgef4-208ENSMUST00000211073 171 ntBASIC17.02■□□□□ 0.32
Trim6Q8BGE7 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC17.02■□□□□ 0.32
Trim6Q8BGE7 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC17.02■□□□□ 0.32
Trim6Q8BGE7 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC17.02■□□□□ 0.32
Trim6Q8BGE7 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim6Q8BGE7 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Trim6Q8BGE7 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trim6Q8BGE7 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
Trim6Q8BGE7 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC17.02■□□□□ 0.31
Trim6Q8BGE7 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.31
Trim6Q8BGE7 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trim6Q8BGE7 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trim6Q8BGE7 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trim6Q8BGE7 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim6Q8BGE7 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim6Q8BGE7 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim6Q8BGE7 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim6Q8BGE7 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim6Q8BGE7 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim6Q8BGE7 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC17.01■□□□□ 0.31
Trim6Q8BGE7 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trim6Q8BGE7 Gm18115-201ENSMUST00000221209 621 ntBASIC17.01■□□□□ 0.31
Trim6Q8BGE7 AC159205.3-201ENSMUST00000224614 874 ntBASIC17.01■□□□□ 0.31
Trim6Q8BGE7 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim6Q8BGE7 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Trim6Q8BGE7 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Trim6Q8BGE7 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim6Q8BGE7 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim6Q8BGE7 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim6Q8BGE7 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim6Q8BGE7 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim6Q8BGE7 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim6Q8BGE7 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim6Q8BGE7 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim6Q8BGE7 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC17.01■□□□□ 0.31
Trim6Q8BGE7 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim6Q8BGE7 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC17■□□□□ 0.31
Trim6Q8BGE7 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trim6Q8BGE7 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Trim6Q8BGE7 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC17■□□□□ 0.31
Trim6Q8BGE7 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC17■□□□□ 0.31
Trim6Q8BGE7 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trim6Q8BGE7 Gm42473-201ENSMUST00000201056 2291 ntBASIC17■□□□□ 0.31
Trim6Q8BGE7 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Trim6Q8BGE7 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trim6Q8BGE7 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Trim6Q8BGE7 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trim6Q8BGE7 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trim6Q8BGE7 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC17■□□□□ 0.31
Trim6Q8BGE7 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trim6Q8BGE7 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trim6Q8BGE7 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trim6Q8BGE7 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC17■□□□□ 0.31
Trim6Q8BGE7 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trim6Q8BGE7 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC17■□□□□ 0.31
Trim6Q8BGE7 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trim6Q8BGE7 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trim6Q8BGE7 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trim6Q8BGE7 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trim6Q8BGE7 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Trim6Q8BGE7 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Trim6Q8BGE7 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Trim6Q8BGE7 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trim6Q8BGE7 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Trim6Q8BGE7 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC17■□□□□ 0.31
Trim6Q8BGE7 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trim6Q8BGE7 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim6Q8BGE7 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim6Q8BGE7 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim6Q8BGE7 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim6Q8BGE7 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim6Q8BGE7 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim6Q8BGE7 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC16.99■□□□□ 0.31
Trim6Q8BGE7 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim6Q8BGE7 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC16.99■□□□□ 0.31
Trim6Q8BGE7 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim6Q8BGE7 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim6Q8BGE7 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim6Q8BGE7 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Trim6Q8BGE7 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trim6Q8BGE7 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim6Q8BGE7 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trim6Q8BGE7 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim6Q8BGE7 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim6Q8BGE7 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim6Q8BGE7 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim6Q8BGE7 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Trim6Q8BGE7 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trim6Q8BGE7 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim6Q8BGE7 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim6Q8BGE7 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim6Q8BGE7 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Trim6Q8BGE7 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim6Q8BGE7 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim6Q8BGE7 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Trim6Q8BGE7 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim6Q8BGE7 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim6Q8BGE7 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms