Protein–RNA interactions for Protein: Q8BFW4

Trim65, Tripartite motif-containing protein 65, mousemouse

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim65Q8BFW4 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trim65Q8BFW4 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim65Q8BFW4 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trim65Q8BFW4 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim65Q8BFW4 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim65Q8BFW4 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Trim65Q8BFW4 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim65Q8BFW4 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Trim65Q8BFW4 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Trim65Q8BFW4 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim65Q8BFW4 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim65Q8BFW4 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Trim65Q8BFW4 Gm27742-201ENSMUST00000184667 60 ntBASIC17.17■□□□□ 0.34
Trim65Q8BFW4 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
Trim65Q8BFW4 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim65Q8BFW4 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim65Q8BFW4 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim65Q8BFW4 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Trim65Q8BFW4 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim65Q8BFW4 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Trim65Q8BFW4 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim65Q8BFW4 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim65Q8BFW4 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Trim65Q8BFW4 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Trim65Q8BFW4 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim65Q8BFW4 AC093043.3-201ENSMUST00000226531 2273 ntBASIC17.17■□□□□ 0.34
Trim65Q8BFW4 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC17.17■□□□□ 0.34
Trim65Q8BFW4 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim65Q8BFW4 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trim65Q8BFW4 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Trim65Q8BFW4 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim65Q8BFW4 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim65Q8BFW4 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Trim65Q8BFW4 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Trim65Q8BFW4 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim65Q8BFW4 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim65Q8BFW4 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Trim65Q8BFW4 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trim65Q8BFW4 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim65Q8BFW4 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim65Q8BFW4 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trim65Q8BFW4 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC17.16■□□□□ 0.34
Trim65Q8BFW4 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC17.16■□□□□ 0.34
Trim65Q8BFW4 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim65Q8BFW4 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
Trim65Q8BFW4 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim65Q8BFW4 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim65Q8BFW4 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC17.16■□□□□ 0.34
Trim65Q8BFW4 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim65Q8BFW4 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim65Q8BFW4 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim65Q8BFW4 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim65Q8BFW4 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim65Q8BFW4 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim65Q8BFW4 Gm44729-201ENSMUST00000206759 2052 ntBASIC17.16■□□□□ 0.34
Trim65Q8BFW4 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim65Q8BFW4 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim65Q8BFW4 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim65Q8BFW4 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim65Q8BFW4 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trim65Q8BFW4 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim65Q8BFW4 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim65Q8BFW4 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim65Q8BFW4 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim65Q8BFW4 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trim65Q8BFW4 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim65Q8BFW4 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trim65Q8BFW4 Gm27704-201ENSMUST00000185094 107 ntBASIC17.15■□□□□ 0.34
Trim65Q8BFW4 Gm33142-201ENSMUST00000193913 867 ntBASIC17.15■□□□□ 0.34
Trim65Q8BFW4 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trim65Q8BFW4 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim65Q8BFW4 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Trim65Q8BFW4 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim65Q8BFW4 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim65Q8BFW4 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim65Q8BFW4 AC153526.5-201ENSMUST00000218661 2147 ntBASIC17.15■□□□□ 0.34
Trim65Q8BFW4 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
Trim65Q8BFW4 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim65Q8BFW4 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim65Q8BFW4 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim65Q8BFW4 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim65Q8BFW4 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim65Q8BFW4 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC17.15■□□□□ 0.34
Trim65Q8BFW4 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Trim65Q8BFW4 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim65Q8BFW4 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Trim65Q8BFW4 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim65Q8BFW4 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim65Q8BFW4 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Trim65Q8BFW4 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trim65Q8BFW4 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.34
Trim65Q8BFW4 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Trim65Q8BFW4 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC17.14■□□□□ 0.33
Trim65Q8BFW4 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC17.14■□□□□ 0.33
Trim65Q8BFW4 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim65Q8BFW4 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Trim65Q8BFW4 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim65Q8BFW4 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim65Q8BFW4 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim65Q8BFW4 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms