Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ubp1Q811S7 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ubp1Q811S7 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Ubp1Q811S7 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ubp1Q811S7 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ubp1Q811S7 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ubp1Q811S7 Gm28265-201ENSMUST00000188201 2319 ntBASIC15.78■□□□□ 0.12
Ubp1Q811S7 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ubp1Q811S7 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ubp1Q811S7 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC15.78■□□□□ 0.12
Ubp1Q811S7 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ubp1Q811S7 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Ubp1Q811S7 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC15.77■□□□□ 0.12
Ubp1Q811S7 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ubp1Q811S7 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Ubp1Q811S7 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Ubp1Q811S7 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Ubp1Q811S7 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ubp1Q811S7 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Ubp1Q811S7 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC15.77■□□□□ 0.12
Ubp1Q811S7 Gm9103-201ENSMUST00000119371 405 ntBASIC15.77■□□□□ 0.12
Ubp1Q811S7 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC15.77■□□□□ 0.12
Ubp1Q811S7 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC15.77■□□□□ 0.12
Ubp1Q811S7 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC15.77■□□□□ 0.12
Ubp1Q811S7 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Ubp1Q811S7 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Ubp1Q811S7 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Ubp1Q811S7 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Ubp1Q811S7 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC15.77■□□□□ 0.11
Ubp1Q811S7 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
Ubp1Q811S7 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC15.77■□□□□ 0.11
Ubp1Q811S7 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Ubp1Q811S7 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Ubp1Q811S7 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
Ubp1Q811S7 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Ubp1Q811S7 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Ubp1Q811S7 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Ubp1Q811S7 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ubp1Q811S7 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ubp1Q811S7 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ubp1Q811S7 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC15.76■□□□□ 0.11
Ubp1Q811S7 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC15.76■□□□□ 0.11
Ubp1Q811S7 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Ubp1Q811S7 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Ubp1Q811S7 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ubp1Q811S7 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Ubp1Q811S7 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC15.76■□□□□ 0.11
Ubp1Q811S7 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC15.76■□□□□ 0.11
Ubp1Q811S7 Gm13312-201ENSMUST00000119631 718 ntBASIC15.76■□□□□ 0.11
Ubp1Q811S7 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
Ubp1Q811S7 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC15.76■□□□□ 0.11
Ubp1Q811S7 AC124569.2-201ENSMUST00000225998 818 ntBASIC15.76■□□□□ 0.11
Ubp1Q811S7 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ubp1Q811S7 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ubp1Q811S7 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
Ubp1Q811S7 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ubp1Q811S7 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Ubp1Q811S7 Gm6858-201ENSMUST00000208582 1468 ntBASIC15.76■□□□□ 0.11
Ubp1Q811S7 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ubp1Q811S7 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ubp1Q811S7 AC132265.1-201ENSMUST00000219233 1665 ntBASIC15.76■□□□□ 0.11
Ubp1Q811S7 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC15.76■□□□□ 0.11
Ubp1Q811S7 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
Ubp1Q811S7 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ubp1Q811S7 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ubp1Q811S7 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Ubp1Q811S7 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ubp1Q811S7 Gm37166-201ENSMUST00000195473 2474 ntBASIC15.75■□□□□ 0.11
Ubp1Q811S7 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ubp1Q811S7 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ubp1Q811S7 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ubp1Q811S7 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC15.75■□□□□ 0.11
Ubp1Q811S7 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ubp1Q811S7 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ubp1Q811S7 Gm18669-201ENSMUST00000216049 778 ntBASIC15.75■□□□□ 0.11
Ubp1Q811S7 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC15.75■□□□□ 0.11
Ubp1Q811S7 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Ubp1Q811S7 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ubp1Q811S7 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC15.75■□□□□ 0.11
Ubp1Q811S7 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Ubp1Q811S7 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC15.75■□□□□ 0.11
Ubp1Q811S7 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ubp1Q811S7 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ubp1Q811S7 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ubp1Q811S7 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ubp1Q811S7 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ubp1Q811S7 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Ubp1Q811S7 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ubp1Q811S7 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Ubp1Q811S7 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ubp1Q811S7 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Ubp1Q811S7 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ubp1Q811S7 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ubp1Q811S7 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ubp1Q811S7 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC15.74■□□□□ 0.11
Ubp1Q811S7 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ubp1Q811S7 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC15.74■□□□□ 0.11
Ubp1Q811S7 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ubp1Q811S7 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ubp1Q811S7 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms