Protein–RNA interactions for Protein: Q811I0

Atpaf1, ATP synthase mitochondrial F1 complex assembly factor 1, mousemouse

Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atpaf1Q811I0 Mtag2-201ENSMUST00000058665 714 ntBASIC13.13□□□□□ -0.31
Atpaf1Q811I0 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Atpaf1Q811I0 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Atpaf1Q811I0 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
Atpaf1Q811I0 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Atpaf1Q811I0 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC13.13□□□□□ -0.31
Atpaf1Q811I0 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Atpaf1Q811I0 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Atpaf1Q811I0 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Atpaf1Q811I0 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Atpaf1Q811I0 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Atpaf1Q811I0 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Atpaf1Q811I0 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Atpaf1Q811I0 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Atpaf1Q811I0 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Atpaf1Q811I0 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Atpaf1Q811I0 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Atpaf1Q811I0 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Atpaf1Q811I0 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Atpaf1Q811I0 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC13.12□□□□□ -0.31
Atpaf1Q811I0 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Atpaf1Q811I0 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Atpaf1Q811I0 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Atpaf1Q811I0 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Atpaf1Q811I0 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Atpaf1Q811I0 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Atpaf1Q811I0 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Atpaf1Q811I0 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Atpaf1Q811I0 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC13.12□□□□□ -0.31
Atpaf1Q811I0 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Atpaf1Q811I0 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC13.12□□□□□ -0.31
Atpaf1Q811I0 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Atpaf1Q811I0 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Atpaf1Q811I0 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Atpaf1Q811I0 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Atpaf1Q811I0 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Atpaf1Q811I0 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Atpaf1Q811I0 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Atpaf1Q811I0 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC13.12□□□□□ -0.31
Atpaf1Q811I0 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Atpaf1Q811I0 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Atpaf1Q811I0 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Atpaf1Q811I0 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC13.12□□□□□ -0.31
Atpaf1Q811I0 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Atpaf1Q811I0 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Atpaf1Q811I0 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Atpaf1Q811I0 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Atpaf1Q811I0 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Atpaf1Q811I0 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Atpaf1Q811I0 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
Atpaf1Q811I0 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Atpaf1Q811I0 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Atpaf1Q811I0 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Atpaf1Q811I0 Gm37305-201ENSMUST00000195714 4279 ntBASIC13.11□□□□□ -0.31
Atpaf1Q811I0 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Atpaf1Q811I0 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Atpaf1Q811I0 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Atpaf1Q811I0 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC13.11□□□□□ -0.31
Atpaf1Q811I0 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Atpaf1Q811I0 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Atpaf1Q811I0 AV356131-201ENSMUST00000206201 750 ntBASIC13.11□□□□□ -0.31
Atpaf1Q811I0 Gm4974-201ENSMUST00000209974 875 ntBASIC13.11□□□□□ -0.31
Atpaf1Q811I0 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Atpaf1Q811I0 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Atpaf1Q811I0 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Atpaf1Q811I0 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC13.11□□□□□ -0.31
Atpaf1Q811I0 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC13.11□□□□□ -0.31
Atpaf1Q811I0 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Atpaf1Q811I0 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC13.11□□□□□ -0.31
Atpaf1Q811I0 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Atpaf1Q811I0 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Atpaf1Q811I0 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC13.1□□□□□ -0.31
Atpaf1Q811I0 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Atpaf1Q811I0 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Atpaf1Q811I0 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Atpaf1Q811I0 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC13.1□□□□□ -0.31
Atpaf1Q811I0 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
Atpaf1Q811I0 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Atpaf1Q811I0 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Atpaf1Q811I0 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Atpaf1Q811I0 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC13.1□□□□□ -0.31
Atpaf1Q811I0 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Atpaf1Q811I0 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC13.1□□□□□ -0.31
Atpaf1Q811I0 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Atpaf1Q811I0 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC13.1□□□□□ -0.31
Atpaf1Q811I0 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Atpaf1Q811I0 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Atpaf1Q811I0 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC13.1□□□□□ -0.31
Atpaf1Q811I0 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC13.1□□□□□ -0.31
Atpaf1Q811I0 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Atpaf1Q811I0 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Atpaf1Q811I0 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Atpaf1Q811I0 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Atpaf1Q811I0 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Atpaf1Q811I0 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Atpaf1Q811I0 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Atpaf1Q811I0 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Atpaf1Q811I0 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Atpaf1Q811I0 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Atpaf1Q811I0 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC13.1□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms