Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Usp6nlQ80XC3 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Usp6nlQ80XC3 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Usp6nlQ80XC3 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Usp6nlQ80XC3 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Usp6nlQ80XC3 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Usp6nlQ80XC3 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Usp6nlQ80XC3 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Usp6nlQ80XC3 Gm45244-201ENSMUST00000211328 2200 ntBASIC17.63■□□□□ 0.41
Usp6nlQ80XC3 Gm5648-201ENSMUST00000122244 1587 ntBASIC17.63■□□□□ 0.41
Usp6nlQ80XC3 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Usp6nlQ80XC3 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Usp6nlQ80XC3 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Usp6nlQ80XC3 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Usp6nlQ80XC3 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Usp6nlQ80XC3 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC17.63■□□□□ 0.41
Usp6nlQ80XC3 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC17.63■□□□□ 0.41
Usp6nlQ80XC3 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Usp6nlQ80XC3 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Usp6nlQ80XC3 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Usp6nlQ80XC3 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Usp6nlQ80XC3 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Usp6nlQ80XC3 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Usp6nlQ80XC3 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Usp6nlQ80XC3 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC17.62■□□□□ 0.41
Usp6nlQ80XC3 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Usp6nlQ80XC3 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC17.62■□□□□ 0.41
Usp6nlQ80XC3 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Usp6nlQ80XC3 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Usp6nlQ80XC3 Gm26308-201ENSMUST00000157768 69 ntBASIC17.62■□□□□ 0.41
Usp6nlQ80XC3 AC131709.1-201ENSMUST00000224731 1180 ntBASIC17.62■□□□□ 0.41
Usp6nlQ80XC3 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Usp6nlQ80XC3 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Usp6nlQ80XC3 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Usp6nlQ80XC3 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Usp6nlQ80XC3 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Usp6nlQ80XC3 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Usp6nlQ80XC3 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Usp6nlQ80XC3 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Usp6nlQ80XC3 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Usp6nlQ80XC3 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Usp6nlQ80XC3 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Usp6nlQ80XC3 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC17.62■□□□□ 0.41
Usp6nlQ80XC3 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Usp6nlQ80XC3 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC17.61■□□□□ 0.41
Usp6nlQ80XC3 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Usp6nlQ80XC3 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Usp6nlQ80XC3 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Usp6nlQ80XC3 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Usp6nlQ80XC3 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Usp6nlQ80XC3 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Usp6nlQ80XC3 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Usp6nlQ80XC3 Gm4913-201ENSMUST00000117075 1290 ntBASIC17.61■□□□□ 0.41
Usp6nlQ80XC3 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
Usp6nlQ80XC3 Gm45167-201ENSMUST00000208007 322 ntBASIC17.61■□□□□ 0.41
Usp6nlQ80XC3 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Usp6nlQ80XC3 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Usp6nlQ80XC3 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Usp6nlQ80XC3 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC17.61■□□□□ 0.41
Usp6nlQ80XC3 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Usp6nlQ80XC3 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Usp6nlQ80XC3 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC17.61■□□□□ 0.41
Usp6nlQ80XC3 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
Usp6nlQ80XC3 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Usp6nlQ80XC3 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Usp6nlQ80XC3 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Usp6nlQ80XC3 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Usp6nlQ80XC3 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
Usp6nlQ80XC3 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Usp6nlQ80XC3 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Usp6nlQ80XC3 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Usp6nlQ80XC3 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Usp6nlQ80XC3 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC17.6■□□□□ 0.41
Usp6nlQ80XC3 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Usp6nlQ80XC3 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Usp6nlQ80XC3 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC17.6■□□□□ 0.41
Usp6nlQ80XC3 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC17.6■□□□□ 0.41
Usp6nlQ80XC3 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC17.6■□□□□ 0.41
Usp6nlQ80XC3 Gm27300-201ENSMUST00000184085 97 ntBASIC17.6■□□□□ 0.41
Usp6nlQ80XC3 Gm27335-201ENSMUST00000184758 97 ntBASIC17.6■□□□□ 0.41
Usp6nlQ80XC3 Gm37153-201ENSMUST00000193637 231 ntBASIC17.6■□□□□ 0.41
Usp6nlQ80XC3 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
Usp6nlQ80XC3 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Usp6nlQ80XC3 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC17.6■□□□□ 0.41
Usp6nlQ80XC3 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Usp6nlQ80XC3 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Usp6nlQ80XC3 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Usp6nlQ80XC3 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Usp6nlQ80XC3 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Usp6nlQ80XC3 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Usp6nlQ80XC3 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Usp6nlQ80XC3 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Usp6nlQ80XC3 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Usp6nlQ80XC3 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Usp6nlQ80XC3 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
Usp6nlQ80XC3 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC17.59■□□□□ 0.41
Usp6nlQ80XC3 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Usp6nlQ80XC3 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Usp6nlQ80XC3 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
Usp6nlQ80XC3 Gm4899-201ENSMUST00000178708 719 ntBASIC17.59■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 9.9 ms