Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Vrk1Q80X41 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Vrk1Q80X41 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Vrk1Q80X41 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Vrk1Q80X41 Gm15467-201ENSMUST00000120582 445 ntBASIC15.26■□□□□ 0.03
Vrk1Q80X41 Gm25406-201ENSMUST00000157599 105 ntBASIC15.26■□□□□ 0.03
Vrk1Q80X41 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC15.26■□□□□ 0.03
Vrk1Q80X41 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC15.26■□□□□ 0.03
Vrk1Q80X41 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Vrk1Q80X41 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vrk1Q80X41 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC15.26■□□□□ 0.03
Vrk1Q80X41 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vrk1Q80X41 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vrk1Q80X41 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vrk1Q80X41 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Vrk1Q80X41 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Vrk1Q80X41 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vrk1Q80X41 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vrk1Q80X41 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Vrk1Q80X41 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Vrk1Q80X41 Gm37500-201ENSMUST00000192059 1443 ntBASIC15.26■□□□□ 0.03
Vrk1Q80X41 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vrk1Q80X41 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Vrk1Q80X41 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Vrk1Q80X41 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vrk1Q80X41 Gm5837-201ENSMUST00000191844 1369 ntBASIC15.25■□□□□ 0.03
Vrk1Q80X41 Hivep3-201ENSMUST00000084306 2973 ntBASIC15.25■□□□□ 0.03
Vrk1Q80X41 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vrk1Q80X41 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vrk1Q80X41 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Vrk1Q80X41 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vrk1Q80X41 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Vrk1Q80X41 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Vrk1Q80X41 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC15.25■□□□□ 0.03
Vrk1Q80X41 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
Vrk1Q80X41 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Vrk1Q80X41 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Vrk1Q80X41 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vrk1Q80X41 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC15.25■□□□□ 0.03
Vrk1Q80X41 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vrk1Q80X41 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vrk1Q80X41 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vrk1Q80X41 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Vrk1Q80X41 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Vrk1Q80X41 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vrk1Q80X41 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vrk1Q80X41 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vrk1Q80X41 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vrk1Q80X41 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vrk1Q80X41 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
Vrk1Q80X41 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vrk1Q80X41 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vrk1Q80X41 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Vrk1Q80X41 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vrk1Q80X41 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Vrk1Q80X41 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vrk1Q80X41 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vrk1Q80X41 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC15.24■□□□□ 0.03
Vrk1Q80X41 AC154222.1-201ENSMUST00000223882 475 ntBASIC15.24■□□□□ 0.03
Vrk1Q80X41 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vrk1Q80X41 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vrk1Q80X41 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Vrk1Q80X41 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vrk1Q80X41 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC15.24■□□□□ 0.03
Vrk1Q80X41 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vrk1Q80X41 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vrk1Q80X41 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vrk1Q80X41 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Vrk1Q80X41 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vrk1Q80X41 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Vrk1Q80X41 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC15.23■□□□□ 0.03
Vrk1Q80X41 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC15.23■□□□□ 0.03
Vrk1Q80X41 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vrk1Q80X41 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vrk1Q80X41 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vrk1Q80X41 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vrk1Q80X41 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Vrk1Q80X41 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC15.23■□□□□ 0.03
Vrk1Q80X41 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Vrk1Q80X41 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Vrk1Q80X41 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vrk1Q80X41 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Vrk1Q80X41 Gm42670-201ENSMUST00000201816 1292 ntBASIC15.23■□□□□ 0.03
Vrk1Q80X41 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC15.23■□□□□ 0.03
Vrk1Q80X41 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC15.23■□□□□ 0.03
Vrk1Q80X41 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vrk1Q80X41 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vrk1Q80X41 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vrk1Q80X41 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Vrk1Q80X41 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vrk1Q80X41 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Vrk1Q80X41 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vrk1Q80X41 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Vrk1Q80X41 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Vrk1Q80X41 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC15.22■□□□□ 0.03
Vrk1Q80X41 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vrk1Q80X41 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vrk1Q80X41 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC15.22■□□□□ 0.03
Vrk1Q80X41 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Vrk1Q80X41 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms