Protein–RNA interactions for Protein: Q80WG7

Trim36, E3 ubiquitin-protein ligase Trim36, mousemouse

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim36Q80WG7 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC15.48■□□□□ 0.07
Trim36Q80WG7 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trim36Q80WG7 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trim36Q80WG7 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trim36Q80WG7 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trim36Q80WG7 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Trim36Q80WG7 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trim36Q80WG7 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trim36Q80WG7 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trim36Q80WG7 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Trim36Q80WG7 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC15.48■□□□□ 0.07
Trim36Q80WG7 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trim36Q80WG7 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Trim36Q80WG7 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trim36Q80WG7 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trim36Q80WG7 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Trim36Q80WG7 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trim36Q80WG7 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trim36Q80WG7 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC15.47■□□□□ 0.07
Trim36Q80WG7 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trim36Q80WG7 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trim36Q80WG7 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC15.47■□□□□ 0.07
Trim36Q80WG7 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
Trim36Q80WG7 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trim36Q80WG7 Gm38042-201ENSMUST00000191614 5208 ntBASIC15.47■□□□□ 0.07
Trim36Q80WG7 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Trim36Q80WG7 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC15.47■□□□□ 0.07
Trim36Q80WG7 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trim36Q80WG7 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC15.47■□□□□ 0.07
Trim36Q80WG7 Gm21559-201ENSMUST00000220638 855 ntBASIC15.47■□□□□ 0.07
Trim36Q80WG7 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trim36Q80WG7 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trim36Q80WG7 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trim36Q80WG7 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Trim36Q80WG7 Gm8587-201ENSMUST00000076538 843 ntBASIC15.47■□□□□ 0.07
Trim36Q80WG7 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trim36Q80WG7 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Trim36Q80WG7 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trim36Q80WG7 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trim36Q80WG7 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trim36Q80WG7 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trim36Q80WG7 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trim36Q80WG7 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trim36Q80WG7 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Trim36Q80WG7 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trim36Q80WG7 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trim36Q80WG7 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trim36Q80WG7 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trim36Q80WG7 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Trim36Q80WG7 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Trim36Q80WG7 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trim36Q80WG7 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trim36Q80WG7 Gm8258-201ENSMUST00000055593 1449 ntBASIC15.46■□□□□ 0.07
Trim36Q80WG7 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Trim36Q80WG7 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trim36Q80WG7 Wnt10b-204ENSMUST00000226655 1807 ntBASIC15.46■□□□□ 0.07
Trim36Q80WG7 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC15.46■□□□□ 0.07
Trim36Q80WG7 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Trim36Q80WG7 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
Trim36Q80WG7 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trim36Q80WG7 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trim36Q80WG7 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trim36Q80WG7 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Trim36Q80WG7 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trim36Q80WG7 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Trim36Q80WG7 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC15.46■□□□□ 0.07
Trim36Q80WG7 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trim36Q80WG7 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Trim36Q80WG7 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Trim36Q80WG7 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Trim36Q80WG7 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trim36Q80WG7 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Trim36Q80WG7 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC15.46■□□□□ 0.06
Trim36Q80WG7 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Trim36Q80WG7 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC15.46■□□□□ 0.06
Trim36Q80WG7 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC15.46■□□□□ 0.06
Trim36Q80WG7 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Trim36Q80WG7 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC15.46■□□□□ 0.06
Trim36Q80WG7 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Trim36Q80WG7 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
Trim36Q80WG7 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trim36Q80WG7 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Trim36Q80WG7 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Trim36Q80WG7 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trim36Q80WG7 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trim36Q80WG7 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trim36Q80WG7 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trim36Q80WG7 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trim36Q80WG7 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trim36Q80WG7 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trim36Q80WG7 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trim36Q80WG7 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trim36Q80WG7 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC15.45■□□□□ 0.06
Trim36Q80WG7 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC15.45■□□□□ 0.06
Trim36Q80WG7 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC15.45■□□□□ 0.06
Trim36Q80WG7 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trim36Q80WG7 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC15.45■□□□□ 0.06
Trim36Q80WG7 Mir1668-201ENSMUST00000184114 107 ntBASIC15.45■□□□□ 0.06
Trim36Q80WG7 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC15.45■□□□□ 0.06
Trim36Q80WG7 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms