Protein–RNA interactions for Protein: Q80V85

Trim62, E3 ubiquitin-protein ligase TRIM62, mousemouse

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim62Q80V85 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim62Q80V85 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trim62Q80V85 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim62Q80V85 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
Trim62Q80V85 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trim62Q80V85 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim62Q80V85 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
Trim62Q80V85 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim62Q80V85 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim62Q80V85 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim62Q80V85 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim62Q80V85 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trim62Q80V85 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim62Q80V85 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim62Q80V85 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
Trim62Q80V85 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC16.53■□□□□ 0.24
Trim62Q80V85 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC16.53■□□□□ 0.24
Trim62Q80V85 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim62Q80V85 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC16.53■□□□□ 0.24
Trim62Q80V85 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim62Q80V85 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim62Q80V85 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim62Q80V85 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Trim62Q80V85 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC16.53■□□□□ 0.24
Trim62Q80V85 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trim62Q80V85 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim62Q80V85 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trim62Q80V85 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
Trim62Q80V85 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim62Q80V85 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trim62Q80V85 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trim62Q80V85 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trim62Q80V85 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trim62Q80V85 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trim62Q80V85 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trim62Q80V85 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC16.52■□□□□ 0.24
Trim62Q80V85 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trim62Q80V85 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Trim62Q80V85 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trim62Q80V85 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Trim62Q80V85 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trim62Q80V85 Gm24589-201ENSMUST00000116692 94 ntBASIC16.52■□□□□ 0.24
Trim62Q80V85 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Trim62Q80V85 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC16.52■□□□□ 0.24
Trim62Q80V85 Gm34391-201ENSMUST00000203706 907 ntBASIC16.52■□□□□ 0.24
Trim62Q80V85 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Trim62Q80V85 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trim62Q80V85 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Trim62Q80V85 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trim62Q80V85 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trim62Q80V85 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trim62Q80V85 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trim62Q80V85 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trim62Q80V85 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Trim62Q80V85 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim62Q80V85 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trim62Q80V85 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim62Q80V85 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Trim62Q80V85 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim62Q80V85 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Trim62Q80V85 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC16.51■□□□□ 0.23
Trim62Q80V85 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC16.51■□□□□ 0.23
Trim62Q80V85 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim62Q80V85 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim62Q80V85 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Trim62Q80V85 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Trim62Q80V85 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim62Q80V85 Gm27459-201ENSMUST00000184860 107 ntBASIC16.51■□□□□ 0.23
Trim62Q80V85 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC16.51■□□□□ 0.23
Trim62Q80V85 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC16.51■□□□□ 0.23
Trim62Q80V85 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Trim62Q80V85 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim62Q80V85 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Trim62Q80V85 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trim62Q80V85 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC16.51■□□□□ 0.23
Trim62Q80V85 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trim62Q80V85 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim62Q80V85 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trim62Q80V85 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim62Q80V85 Gm5837-201ENSMUST00000191844 1369 ntBASIC16.51■□□□□ 0.23
Trim62Q80V85 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim62Q80V85 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim62Q80V85 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC16.5■□□□□ 0.23
Trim62Q80V85 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim62Q80V85 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim62Q80V85 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trim62Q80V85 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trim62Q80V85 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Trim62Q80V85 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim62Q80V85 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim62Q80V85 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
Trim62Q80V85 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim62Q80V85 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Trim62Q80V85 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC16.5■□□□□ 0.23
Trim62Q80V85 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC16.5■□□□□ 0.23
Trim62Q80V85 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trim62Q80V85 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim62Q80V85 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC16.5■□□□□ 0.23
Trim62Q80V85 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC16.5■□□□□ 0.23
Trim62Q80V85 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms