Protein–RNA interactions for Protein: Q6ZQH8

Nup188, Nucleoporin NUP188 homolog, mousemouse

Predictions only

Length 1,759 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup188Q6ZQH8 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Nup188Q6ZQH8 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Nup188Q6ZQH8 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC18.87■□□□□ 0.61
Nup188Q6ZQH8 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nup188Q6ZQH8 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nup188Q6ZQH8 CT025626.1-201ENSMUST00000223735 1455 ntBASIC18.87■□□□□ 0.61
Nup188Q6ZQH8 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Nup188Q6ZQH8 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nup188Q6ZQH8 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC18.87■□□□□ 0.61
Nup188Q6ZQH8 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nup188Q6ZQH8 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Nup188Q6ZQH8 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nup188Q6ZQH8 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Nup188Q6ZQH8 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Nup188Q6ZQH8 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nup188Q6ZQH8 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nup188Q6ZQH8 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nup188Q6ZQH8 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nup188Q6ZQH8 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
Nup188Q6ZQH8 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nup188Q6ZQH8 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nup188Q6ZQH8 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nup188Q6ZQH8 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC18.86■□□□□ 0.61
Nup188Q6ZQH8 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nup188Q6ZQH8 Gm16198-201ENSMUST00000118766 670 ntBASIC18.86■□□□□ 0.61
Nup188Q6ZQH8 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Nup188Q6ZQH8 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Nup188Q6ZQH8 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Nup188Q6ZQH8 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC18.86■□□□□ 0.61
Nup188Q6ZQH8 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nup188Q6ZQH8 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC18.86■□□□□ 0.61
Nup188Q6ZQH8 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nup188Q6ZQH8 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nup188Q6ZQH8 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nup188Q6ZQH8 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nup188Q6ZQH8 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nup188Q6ZQH8 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
Nup188Q6ZQH8 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nup188Q6ZQH8 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Nup188Q6ZQH8 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nup188Q6ZQH8 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nup188Q6ZQH8 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nup188Q6ZQH8 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Nup188Q6ZQH8 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
Nup188Q6ZQH8 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nup188Q6ZQH8 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nup188Q6ZQH8 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nup188Q6ZQH8 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Nup188Q6ZQH8 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nup188Q6ZQH8 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
Nup188Q6ZQH8 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC18.85■□□□□ 0.61
Nup188Q6ZQH8 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC18.85■□□□□ 0.61
Nup188Q6ZQH8 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC18.85■□□□□ 0.61
Nup188Q6ZQH8 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC18.85■□□□□ 0.61
Nup188Q6ZQH8 Gm20553-201ENSMUST00000204205 844 ntBASIC18.85■□□□□ 0.61
Nup188Q6ZQH8 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nup188Q6ZQH8 Wnt10b-206ENSMUST00000228546 2709 ntBASIC18.85■□□□□ 0.61
Nup188Q6ZQH8 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nup188Q6ZQH8 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nup188Q6ZQH8 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nup188Q6ZQH8 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nup188Q6ZQH8 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nup188Q6ZQH8 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Nup188Q6ZQH8 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Nup188Q6ZQH8 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Nup188Q6ZQH8 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC18.84■□□□□ 0.61
Nup188Q6ZQH8 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nup188Q6ZQH8 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nup188Q6ZQH8 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nup188Q6ZQH8 AC154767.3-201ENSMUST00000225150 1342 ntBASIC18.84■□□□□ 0.61
Nup188Q6ZQH8 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC18.83■□□□□ 0.61
Nup188Q6ZQH8 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC18.83■□□□□ 0.61
Nup188Q6ZQH8 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC18.83■□□□□ 0.61
Nup188Q6ZQH8 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC18.83■□□□□ 0.61
Nup188Q6ZQH8 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Nup188Q6ZQH8 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Nup188Q6ZQH8 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Nup188Q6ZQH8 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nup188Q6ZQH8 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nup188Q6ZQH8 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Nup188Q6ZQH8 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Nup188Q6ZQH8 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC18.83■□□□□ 0.6
Nup188Q6ZQH8 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC18.83■□□□□ 0.6
Nup188Q6ZQH8 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nup188Q6ZQH8 Gpr146-202ENSMUST00000053120 1040 ntBASIC18.83■□□□□ 0.6
Nup188Q6ZQH8 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nup188Q6ZQH8 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nup188Q6ZQH8 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nup188Q6ZQH8 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Nup188Q6ZQH8 AC115863.1-201ENSMUST00000214815 1813 ntBASIC18.82■□□□□ 0.6
Nup188Q6ZQH8 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nup188Q6ZQH8 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Nup188Q6ZQH8 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nup188Q6ZQH8 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nup188Q6ZQH8 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Nup188Q6ZQH8 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
Nup188Q6ZQH8 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nup188Q6ZQH8 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nup188Q6ZQH8 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Nup188Q6ZQH8 Gm22065-201ENSMUST00000103753 110 ntBASIC18.82■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms