Protein–RNA interactions for Protein: Q6T3U4

Npc1l1, Niemann-Pick C1-like protein 1, mousemouse

Predictions only

Length 1,333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1l1Q6T3U4 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Npc1l1Q6T3U4 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Npc1l1Q6T3U4 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Npc1l1Q6T3U4 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Npc1l1Q6T3U4 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Npc1l1Q6T3U4 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Npc1l1Q6T3U4 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC19.14■□□□□ 0.65
Npc1l1Q6T3U4 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC19.14■□□□□ 0.65
Npc1l1Q6T3U4 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC19.14■□□□□ 0.65
Npc1l1Q6T3U4 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC19.14■□□□□ 0.65
Npc1l1Q6T3U4 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC19.14■□□□□ 0.65
Npc1l1Q6T3U4 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Npc1l1Q6T3U4 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC19.14■□□□□ 0.65
Npc1l1Q6T3U4 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Npc1l1Q6T3U4 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Npc1l1Q6T3U4 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Npc1l1Q6T3U4 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Npc1l1Q6T3U4 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Npc1l1Q6T3U4 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Npc1l1Q6T3U4 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Npc1l1Q6T3U4 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Npc1l1Q6T3U4 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Npc1l1Q6T3U4 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Npc1l1Q6T3U4 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Npc1l1Q6T3U4 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Npc1l1Q6T3U4 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC19.13■□□□□ 0.65
Npc1l1Q6T3U4 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Npc1l1Q6T3U4 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Npc1l1Q6T3U4 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Npc1l1Q6T3U4 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC19.13■□□□□ 0.65
Npc1l1Q6T3U4 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC19.13■□□□□ 0.65
Npc1l1Q6T3U4 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Npc1l1Q6T3U4 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC19.13■□□□□ 0.65
Npc1l1Q6T3U4 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Npc1l1Q6T3U4 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Npc1l1Q6T3U4 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
Npc1l1Q6T3U4 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Npc1l1Q6T3U4 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC19.13■□□□□ 0.65
Npc1l1Q6T3U4 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Npc1l1Q6T3U4 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Npc1l1Q6T3U4 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Npc1l1Q6T3U4 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Npc1l1Q6T3U4 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Npc1l1Q6T3U4 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Npc1l1Q6T3U4 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Npc1l1Q6T3U4 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Npc1l1Q6T3U4 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Npc1l1Q6T3U4 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Npc1l1Q6T3U4 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Npc1l1Q6T3U4 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
Npc1l1Q6T3U4 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Npc1l1Q6T3U4 Gm8097-201ENSMUST00000117903 829 ntBASIC19.12■□□□□ 0.65
Npc1l1Q6T3U4 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC19.12■□□□□ 0.65
Npc1l1Q6T3U4 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Npc1l1Q6T3U4 Gm8655-201ENSMUST00000221159 852 ntBASIC19.12■□□□□ 0.65
Npc1l1Q6T3U4 Psmb5-202ENSMUST00000227257 622 ntBASIC19.12■□□□□ 0.65
Npc1l1Q6T3U4 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Npc1l1Q6T3U4 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Npc1l1Q6T3U4 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Npc1l1Q6T3U4 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Npc1l1Q6T3U4 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Npc1l1Q6T3U4 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Npc1l1Q6T3U4 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Npc1l1Q6T3U4 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC19.11■□□□□ 0.65
Npc1l1Q6T3U4 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Npc1l1Q6T3U4 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC19.11■□□□□ 0.65
Npc1l1Q6T3U4 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Npc1l1Q6T3U4 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Npc1l1Q6T3U4 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Npc1l1Q6T3U4 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Npc1l1Q6T3U4 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Npc1l1Q6T3U4 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC19.11■□□□□ 0.65
Npc1l1Q6T3U4 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC19.11■□□□□ 0.65
Npc1l1Q6T3U4 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Npc1l1Q6T3U4 Gm37584-201ENSMUST00000193595 1290 ntBASIC19.11■□□□□ 0.65
Npc1l1Q6T3U4 Gm2213-201ENSMUST00000197485 688 ntBASIC19.11■□□□□ 0.65
Npc1l1Q6T3U4 AC154757.1-201ENSMUST00000228289 336 ntBASIC19.11■□□□□ 0.65
Npc1l1Q6T3U4 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Npc1l1Q6T3U4 Gm15590-201ENSMUST00000078419 552 ntBASIC19.11■□□□□ 0.65
Npc1l1Q6T3U4 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC19.11■□□□□ 0.65
Npc1l1Q6T3U4 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Npc1l1Q6T3U4 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Npc1l1Q6T3U4 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Npc1l1Q6T3U4 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC19.11■□□□□ 0.65
Npc1l1Q6T3U4 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Npc1l1Q6T3U4 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Npc1l1Q6T3U4 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Npc1l1Q6T3U4 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC19.1■□□□□ 0.65
Npc1l1Q6T3U4 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Npc1l1Q6T3U4 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Npc1l1Q6T3U4 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC19.1■□□□□ 0.65
Npc1l1Q6T3U4 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Npc1l1Q6T3U4 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Npc1l1Q6T3U4 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC19.1■□□□□ 0.65
Npc1l1Q6T3U4 Gm42670-201ENSMUST00000201816 1292 ntBASIC19.1■□□□□ 0.65
Npc1l1Q6T3U4 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC19.1■□□□□ 0.65
Npc1l1Q6T3U4 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Npc1l1Q6T3U4 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Npc1l1Q6T3U4 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Npc1l1Q6T3U4 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms