Protein–RNA interactions for Protein: Q6QIY3

Scn10a, Sodium channel protein type 10 subunit alpha, mousemouse

Predictions only

Length 1,958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn10aQ6QIY3 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC18.01■□□□□ 0.47
Scn10aQ6QIY3 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Scn10aQ6QIY3 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Scn10aQ6QIY3 CT025555.1-201ENSMUST00000225901 1217 ntBASIC18.01■□□□□ 0.47
Scn10aQ6QIY3 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Scn10aQ6QIY3 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC18.01■□□□□ 0.47
Scn10aQ6QIY3 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Scn10aQ6QIY3 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Scn10aQ6QIY3 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Scn10aQ6QIY3 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Scn10aQ6QIY3 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Scn10aQ6QIY3 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Scn10aQ6QIY3 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Scn10aQ6QIY3 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Scn10aQ6QIY3 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC18■□□□□ 0.47
Scn10aQ6QIY3 Gm15693-201ENSMUST00000120470 637 ntBASIC18■□□□□ 0.47
Scn10aQ6QIY3 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC18■□□□□ 0.47
Scn10aQ6QIY3 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC18■□□□□ 0.47
Scn10aQ6QIY3 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC18■□□□□ 0.47
Scn10aQ6QIY3 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC18■□□□□ 0.47
Scn10aQ6QIY3 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC18■□□□□ 0.47
Scn10aQ6QIY3 AC140375.2-201ENSMUST00000225283 584 ntBASIC18■□□□□ 0.47
Scn10aQ6QIY3 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC18■□□□□ 0.47
Scn10aQ6QIY3 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Scn10aQ6QIY3 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Scn10aQ6QIY3 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC18■□□□□ 0.47
Scn10aQ6QIY3 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Scn10aQ6QIY3 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC18■□□□□ 0.47
Scn10aQ6QIY3 CT030684.1-201ENSMUST00000227292 914 ntBASIC18■□□□□ 0.47
Scn10aQ6QIY3 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC18■□□□□ 0.47
Scn10aQ6QIY3 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Scn10aQ6QIY3 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC18■□□□□ 0.47
Scn10aQ6QIY3 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Scn10aQ6QIY3 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Scn10aQ6QIY3 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC17.99■□□□□ 0.47
Scn10aQ6QIY3 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Scn10aQ6QIY3 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC17.99■□□□□ 0.47
Scn10aQ6QIY3 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Scn10aQ6QIY3 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Scn10aQ6QIY3 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Scn10aQ6QIY3 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Scn10aQ6QIY3 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC17.99■□□□□ 0.47
Scn10aQ6QIY3 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Scn10aQ6QIY3 Gm6018-201ENSMUST00000216090 1306 ntBASIC17.99■□□□□ 0.47
Scn10aQ6QIY3 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Scn10aQ6QIY3 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Scn10aQ6QIY3 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Scn10aQ6QIY3 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Scn10aQ6QIY3 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Scn10aQ6QIY3 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Scn10aQ6QIY3 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC17.99■□□□□ 0.47
Scn10aQ6QIY3 Gm13216-201ENSMUST00000117145 591 ntBASIC17.99■□□□□ 0.47
Scn10aQ6QIY3 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Scn10aQ6QIY3 AC157650.3-201ENSMUST00000225058 1476 ntBASIC17.99■□□□□ 0.47
Scn10aQ6QIY3 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Scn10aQ6QIY3 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Scn10aQ6QIY3 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Scn10aQ6QIY3 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Scn10aQ6QIY3 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Scn10aQ6QIY3 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Scn10aQ6QIY3 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Scn10aQ6QIY3 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Scn10aQ6QIY3 Gm8318-201ENSMUST00000182954 872 ntBASIC17.98■□□□□ 0.47
Scn10aQ6QIY3 Rbfox2-208ENSMUST00000227930 1218 ntBASIC17.98■□□□□ 0.47
Scn10aQ6QIY3 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Scn10aQ6QIY3 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
Scn10aQ6QIY3 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Scn10aQ6QIY3 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Scn10aQ6QIY3 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Scn10aQ6QIY3 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Scn10aQ6QIY3 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Scn10aQ6QIY3 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Scn10aQ6QIY3 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Scn10aQ6QIY3 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Scn10aQ6QIY3 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Scn10aQ6QIY3 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC17.97■□□□□ 0.47
Scn10aQ6QIY3 AC025913.2-201ENSMUST00000220136 1766 ntBASIC17.97■□□□□ 0.47
Scn10aQ6QIY3 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Scn10aQ6QIY3 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC17.97■□□□□ 0.47
Scn10aQ6QIY3 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC17.97■□□□□ 0.47
Scn10aQ6QIY3 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Scn10aQ6QIY3 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC17.97■□□□□ 0.47
Scn10aQ6QIY3 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Scn10aQ6QIY3 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Scn10aQ6QIY3 Gm18057-201ENSMUST00000208220 503 ntBASIC17.97■□□□□ 0.47
Scn10aQ6QIY3 Arhgef33-209ENSMUST00000225223 714 ntBASIC17.97■□□□□ 0.47
Scn10aQ6QIY3 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Scn10aQ6QIY3 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Scn10aQ6QIY3 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Scn10aQ6QIY3 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Scn10aQ6QIY3 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Scn10aQ6QIY3 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Scn10aQ6QIY3 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Scn10aQ6QIY3 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Scn10aQ6QIY3 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC17.97■□□□□ 0.47
Scn10aQ6QIY3 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Scn10aQ6QIY3 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC17.97■□□□□ 0.47
Scn10aQ6QIY3 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Scn10aQ6QIY3 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC17.97■□□□□ 0.47
Scn10aQ6QIY3 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms