Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rnf220Q6PDX6 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Rnf220Q6PDX6 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rnf220Q6PDX6 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC15.24■□□□□ 0.03
Rnf220Q6PDX6 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rnf220Q6PDX6 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC15.24■□□□□ 0.03
Rnf220Q6PDX6 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rnf220Q6PDX6 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rnf220Q6PDX6 Gm13158-201ENSMUST00000122007 736 ntBASIC15.24■□□□□ 0.03
Rnf220Q6PDX6 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC15.24■□□□□ 0.03
Rnf220Q6PDX6 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC15.24■□□□□ 0.03
Rnf220Q6PDX6 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rnf220Q6PDX6 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rnf220Q6PDX6 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rnf220Q6PDX6 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rnf220Q6PDX6 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rnf220Q6PDX6 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rnf220Q6PDX6 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC15.24■□□□□ 0.03
Rnf220Q6PDX6 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rnf220Q6PDX6 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Rnf220Q6PDX6 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rnf220Q6PDX6 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC15.23■□□□□ 0.03
Rnf220Q6PDX6 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC15.23■□□□□ 0.03
Rnf220Q6PDX6 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rnf220Q6PDX6 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Rnf220Q6PDX6 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC15.23■□□□□ 0.03
Rnf220Q6PDX6 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rnf220Q6PDX6 AC164629.5-201ENSMUST00000220387 632 ntBASIC15.23■□□□□ 0.03
Rnf220Q6PDX6 AC166341.7-201ENSMUST00000221698 126 ntBASIC15.23■□□□□ 0.03
Rnf220Q6PDX6 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rnf220Q6PDX6 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Rnf220Q6PDX6 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rnf220Q6PDX6 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Rnf220Q6PDX6 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rnf220Q6PDX6 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
Rnf220Q6PDX6 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rnf220Q6PDX6 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Rnf220Q6PDX6 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rnf220Q6PDX6 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rnf220Q6PDX6 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
Rnf220Q6PDX6 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rnf220Q6PDX6 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rnf220Q6PDX6 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rnf220Q6PDX6 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC15.22■□□□□ 0.03
Rnf220Q6PDX6 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rnf220Q6PDX6 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rnf220Q6PDX6 AC115863.1-201ENSMUST00000214815 1813 ntBASIC15.22■□□□□ 0.03
Rnf220Q6PDX6 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Rnf220Q6PDX6 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rnf220Q6PDX6 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rnf220Q6PDX6 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Rnf220Q6PDX6 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Rnf220Q6PDX6 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC15.22■□□□□ 0.03
Rnf220Q6PDX6 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Rnf220Q6PDX6 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rnf220Q6PDX6 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rnf220Q6PDX6 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rnf220Q6PDX6 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC15.22■□□□□ 0.03
Rnf220Q6PDX6 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rnf220Q6PDX6 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC15.22■□□□□ 0.03
Rnf220Q6PDX6 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Rnf220Q6PDX6 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rnf220Q6PDX6 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC15.22■□□□□ 0.03
Rnf220Q6PDX6 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC15.22■□□□□ 0.03
Rnf220Q6PDX6 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rnf220Q6PDX6 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rnf220Q6PDX6 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rnf220Q6PDX6 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rnf220Q6PDX6 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rnf220Q6PDX6 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rnf220Q6PDX6 Sorbs3-204ENSMUST00000227929 2460 ntBASIC15.21■□□□□ 0.03
Rnf220Q6PDX6 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Rnf220Q6PDX6 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rnf220Q6PDX6 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rnf220Q6PDX6 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rnf220Q6PDX6 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rnf220Q6PDX6 Gm37728-201ENSMUST00000195025 2292 ntBASIC15.21■□□□□ 0.03
Rnf220Q6PDX6 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Rnf220Q6PDX6 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC15.21■□□□□ 0.03
Rnf220Q6PDX6 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rnf220Q6PDX6 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rnf220Q6PDX6 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rnf220Q6PDX6 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Rnf220Q6PDX6 Wnt10b-204ENSMUST00000226655 1807 ntBASIC15.21■□□□□ 0.03
Rnf220Q6PDX6 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rnf220Q6PDX6 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rnf220Q6PDX6 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Rnf220Q6PDX6 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
Rnf220Q6PDX6 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Rnf220Q6PDX6 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Rnf220Q6PDX6 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
Rnf220Q6PDX6 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
Rnf220Q6PDX6 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Rnf220Q6PDX6 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Rnf220Q6PDX6 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf220Q6PDX6 Gm45605-201ENSMUST00000210265 4269 ntBASIC15.2■□□□□ 0.02
Rnf220Q6PDX6 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Rnf220Q6PDX6 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf220Q6PDX6 Gm43399-201ENSMUST00000202546 2374 ntBASIC15.2■□□□□ 0.02
Rnf220Q6PDX6 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms