Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Chd4Q6PDQ2 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Chd4Q6PDQ2 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Chd4Q6PDQ2 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Chd4Q6PDQ2 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Chd4Q6PDQ2 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Chd4Q6PDQ2 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Chd4Q6PDQ2 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC20.74■□□□□ 0.91
Chd4Q6PDQ2 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC20.74■□□□□ 0.91
Chd4Q6PDQ2 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Chd4Q6PDQ2 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Chd4Q6PDQ2 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Chd4Q6PDQ2 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Chd4Q6PDQ2 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Chd4Q6PDQ2 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Chd4Q6PDQ2 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Chd4Q6PDQ2 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Chd4Q6PDQ2 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Chd4Q6PDQ2 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Chd4Q6PDQ2 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Chd4Q6PDQ2 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Chd4Q6PDQ2 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC20.74■□□□□ 0.91
Chd4Q6PDQ2 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC20.74■□□□□ 0.91
Chd4Q6PDQ2 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Chd4Q6PDQ2 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Chd4Q6PDQ2 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Chd4Q6PDQ2 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Chd4Q6PDQ2 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Chd4Q6PDQ2 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Chd4Q6PDQ2 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Chd4Q6PDQ2 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Chd4Q6PDQ2 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Chd4Q6PDQ2 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Chd4Q6PDQ2 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Chd4Q6PDQ2 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC20.73■□□□□ 0.91
Chd4Q6PDQ2 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Chd4Q6PDQ2 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Chd4Q6PDQ2 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Chd4Q6PDQ2 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Chd4Q6PDQ2 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Chd4Q6PDQ2 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Chd4Q6PDQ2 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Chd4Q6PDQ2 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Chd4Q6PDQ2 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Chd4Q6PDQ2 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Chd4Q6PDQ2 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
Chd4Q6PDQ2 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC20.72■□□□□ 0.91
Chd4Q6PDQ2 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Chd4Q6PDQ2 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC20.72■□□□□ 0.91
Chd4Q6PDQ2 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Chd4Q6PDQ2 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC20.72■□□□□ 0.91
Chd4Q6PDQ2 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Chd4Q6PDQ2 Prkcz2-201ENSMUST00000206136 1756 ntBASIC20.72■□□□□ 0.91
Chd4Q6PDQ2 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Chd4Q6PDQ2 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Chd4Q6PDQ2 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Chd4Q6PDQ2 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Chd4Q6PDQ2 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Chd4Q6PDQ2 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Chd4Q6PDQ2 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Chd4Q6PDQ2 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
Chd4Q6PDQ2 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Chd4Q6PDQ2 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Chd4Q6PDQ2 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Chd4Q6PDQ2 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Chd4Q6PDQ2 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Chd4Q6PDQ2 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Chd4Q6PDQ2 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Chd4Q6PDQ2 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Chd4Q6PDQ2 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Chd4Q6PDQ2 Gm9385-201ENSMUST00000117563 472 ntBASIC20.71■□□□□ 0.91
Chd4Q6PDQ2 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Chd4Q6PDQ2 Mir6990-201ENSMUST00000183724 91 ntBASIC20.71■□□□□ 0.91
Chd4Q6PDQ2 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC20.71■□□□□ 0.91
Chd4Q6PDQ2 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC20.71■□□□□ 0.91
Chd4Q6PDQ2 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Chd4Q6PDQ2 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Chd4Q6PDQ2 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
Chd4Q6PDQ2 Gm5184-201ENSMUST00000220417 1702 ntBASIC20.71■□□□□ 0.91
Chd4Q6PDQ2 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Chd4Q6PDQ2 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Chd4Q6PDQ2 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Chd4Q6PDQ2 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Chd4Q6PDQ2 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC20.7■□□□□ 0.91
Chd4Q6PDQ2 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC20.7■□□□□ 0.91
Chd4Q6PDQ2 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
Chd4Q6PDQ2 Mir6956-201ENSMUST00000183598 62 ntBASIC20.7■□□□□ 0.91
Chd4Q6PDQ2 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.91
Chd4Q6PDQ2 Thap2-203ENSMUST00000218989 527 ntBASIC20.7■□□□□ 0.91
Chd4Q6PDQ2 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Chd4Q6PDQ2 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Chd4Q6PDQ2 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Chd4Q6PDQ2 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Chd4Q6PDQ2 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Chd4Q6PDQ2 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Chd4Q6PDQ2 Nrn1-204ENSMUST00000224323 1779 ntBASIC20.7■□□□□ 0.9
Chd4Q6PDQ2 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Chd4Q6PDQ2 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Chd4Q6PDQ2 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Chd4Q6PDQ2 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC20.7■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms