Protein–RNA interactions for Protein: Q6PCM1

Kdm3a, Lysine-specific demethylase 3A, mousemouse

Predictions only

Length 1,323 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kdm3aQ6PCM1 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Kdm3aQ6PCM1 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Kdm3aQ6PCM1 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Kdm3aQ6PCM1 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Kdm3aQ6PCM1 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC19.25■□□□□ 0.67
Kdm3aQ6PCM1 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Kdm3aQ6PCM1 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Kdm3aQ6PCM1 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Kdm3aQ6PCM1 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Kdm3aQ6PCM1 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Kdm3aQ6PCM1 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Kdm3aQ6PCM1 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Kdm3aQ6PCM1 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC19.24■□□□□ 0.67
Kdm3aQ6PCM1 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Kdm3aQ6PCM1 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Kdm3aQ6PCM1 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC19.24■□□□□ 0.67
Kdm3aQ6PCM1 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Kdm3aQ6PCM1 Gm12350-201ENSMUST00000121208 462 ntBASIC19.24■□□□□ 0.67
Kdm3aQ6PCM1 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Kdm3aQ6PCM1 Gm27646-201ENSMUST00000183989 110 ntBASIC19.24■□□□□ 0.67
Kdm3aQ6PCM1 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC19.24■□□□□ 0.67
Kdm3aQ6PCM1 AV026068-213ENSMUST00000223675 1171 ntBASIC19.24■□□□□ 0.67
Kdm3aQ6PCM1 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Kdm3aQ6PCM1 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC19.23■□□□□ 0.67
Kdm3aQ6PCM1 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Kdm3aQ6PCM1 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Kdm3aQ6PCM1 Gm45244-201ENSMUST00000211328 2200 ntBASIC19.23■□□□□ 0.67
Kdm3aQ6PCM1 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Kdm3aQ6PCM1 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Kdm3aQ6PCM1 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Kdm3aQ6PCM1 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Kdm3aQ6PCM1 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Kdm3aQ6PCM1 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Kdm3aQ6PCM1 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC19.23■□□□□ 0.67
Kdm3aQ6PCM1 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Kdm3aQ6PCM1 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Kdm3aQ6PCM1 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Kdm3aQ6PCM1 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Kdm3aQ6PCM1 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Kdm3aQ6PCM1 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Kdm3aQ6PCM1 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC19.23■□□□□ 0.67
Kdm3aQ6PCM1 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Kdm3aQ6PCM1 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Kdm3aQ6PCM1 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Kdm3aQ6PCM1 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Kdm3aQ6PCM1 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Kdm3aQ6PCM1 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Kdm3aQ6PCM1 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Kdm3aQ6PCM1 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Kdm3aQ6PCM1 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Kdm3aQ6PCM1 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Kdm3aQ6PCM1 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Kdm3aQ6PCM1 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Kdm3aQ6PCM1 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC19.22■□□□□ 0.67
Kdm3aQ6PCM1 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Kdm3aQ6PCM1 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Kdm3aQ6PCM1 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Kdm3aQ6PCM1 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Kdm3aQ6PCM1 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Kdm3aQ6PCM1 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Kdm3aQ6PCM1 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Kdm3aQ6PCM1 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Kdm3aQ6PCM1 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Kdm3aQ6PCM1 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Kdm3aQ6PCM1 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Kdm3aQ6PCM1 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Kdm3aQ6PCM1 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Kdm3aQ6PCM1 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
Kdm3aQ6PCM1 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Kdm3aQ6PCM1 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Kdm3aQ6PCM1 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Kdm3aQ6PCM1 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Kdm3aQ6PCM1 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC19.21■□□□□ 0.67
Kdm3aQ6PCM1 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Kdm3aQ6PCM1 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC19.21■□□□□ 0.67
Kdm3aQ6PCM1 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Kdm3aQ6PCM1 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC19.21■□□□□ 0.67
Kdm3aQ6PCM1 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Kdm3aQ6PCM1 Gm19164-201ENSMUST00000210667 640 ntBASIC19.21■□□□□ 0.67
Kdm3aQ6PCM1 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Kdm3aQ6PCM1 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Kdm3aQ6PCM1 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC19.21■□□□□ 0.67
Kdm3aQ6PCM1 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC19.21■□□□□ 0.67
Kdm3aQ6PCM1 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC19.21■□□□□ 0.67
Kdm3aQ6PCM1 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Kdm3aQ6PCM1 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Kdm3aQ6PCM1 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Kdm3aQ6PCM1 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Kdm3aQ6PCM1 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Kdm3aQ6PCM1 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Kdm3aQ6PCM1 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Kdm3aQ6PCM1 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Kdm3aQ6PCM1 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Kdm3aQ6PCM1 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Kdm3aQ6PCM1 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Kdm3aQ6PCM1 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Kdm3aQ6PCM1 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Kdm3aQ6PCM1 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Kdm3aQ6PCM1 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Kdm3aQ6PCM1 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC19.2■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms