Protein–RNA interactions for Protein: Q6P1Y1

Rtl3, Retrotransposon Gag-like protein 3, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl3Q6P1Y1 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rtl3Q6P1Y1 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rtl3Q6P1Y1 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rtl3Q6P1Y1 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rtl3Q6P1Y1 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rtl3Q6P1Y1 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rtl3Q6P1Y1 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Rtl3Q6P1Y1 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC16.52■□□□□ 0.24
Rtl3Q6P1Y1 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC16.52■□□□□ 0.24
Rtl3Q6P1Y1 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rtl3Q6P1Y1 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rtl3Q6P1Y1 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rtl3Q6P1Y1 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rtl3Q6P1Y1 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rtl3Q6P1Y1 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC16.52■□□□□ 0.24
Rtl3Q6P1Y1 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
Rtl3Q6P1Y1 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Rtl3Q6P1Y1 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Rtl3Q6P1Y1 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Rtl3Q6P1Y1 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Rtl3Q6P1Y1 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Rtl3Q6P1Y1 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Rtl3Q6P1Y1 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Rtl3Q6P1Y1 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Rtl3Q6P1Y1 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rtl3Q6P1Y1 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Rtl3Q6P1Y1 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC16.51■□□□□ 0.23
Rtl3Q6P1Y1 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Rtl3Q6P1Y1 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC16.51■□□□□ 0.23
Rtl3Q6P1Y1 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rtl3Q6P1Y1 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC16.51■□□□□ 0.23
Rtl3Q6P1Y1 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC16.51■□□□□ 0.23
Rtl3Q6P1Y1 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rtl3Q6P1Y1 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Rtl3Q6P1Y1 Gm1818-201ENSMUST00000169406 1184 ntBASIC16.51■□□□□ 0.23
Rtl3Q6P1Y1 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC16.51■□□□□ 0.23
Rtl3Q6P1Y1 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rtl3Q6P1Y1 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC16.51■□□□□ 0.23
Rtl3Q6P1Y1 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC16.51■□□□□ 0.23
Rtl3Q6P1Y1 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rtl3Q6P1Y1 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rtl3Q6P1Y1 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Rtl3Q6P1Y1 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rtl3Q6P1Y1 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Rtl3Q6P1Y1 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Rtl3Q6P1Y1 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC16.51■□□□□ 0.23
Rtl3Q6P1Y1 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rtl3Q6P1Y1 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rtl3Q6P1Y1 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rtl3Q6P1Y1 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Rtl3Q6P1Y1 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rtl3Q6P1Y1 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
Rtl3Q6P1Y1 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rtl3Q6P1Y1 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC16.51■□□□□ 0.23
Rtl3Q6P1Y1 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rtl3Q6P1Y1 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rtl3Q6P1Y1 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Rtl3Q6P1Y1 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rtl3Q6P1Y1 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rtl3Q6P1Y1 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rtl3Q6P1Y1 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rtl3Q6P1Y1 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rtl3Q6P1Y1 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rtl3Q6P1Y1 Gm12644-201ENSMUST00000119935 606 ntBASIC16.5■□□□□ 0.23
Rtl3Q6P1Y1 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Rtl3Q6P1Y1 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Rtl3Q6P1Y1 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rtl3Q6P1Y1 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rtl3Q6P1Y1 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rtl3Q6P1Y1 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rtl3Q6P1Y1 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rtl3Q6P1Y1 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rtl3Q6P1Y1 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rtl3Q6P1Y1 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rtl3Q6P1Y1 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC16.5■□□□□ 0.23
Rtl3Q6P1Y1 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Rtl3Q6P1Y1 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Rtl3Q6P1Y1 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rtl3Q6P1Y1 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC16.5■□□□□ 0.23
Rtl3Q6P1Y1 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Rtl3Q6P1Y1 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rtl3Q6P1Y1 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rtl3Q6P1Y1 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Rtl3Q6P1Y1 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Rtl3Q6P1Y1 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rtl3Q6P1Y1 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC16.49■□□□□ 0.23
Rtl3Q6P1Y1 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC16.49■□□□□ 0.23
Rtl3Q6P1Y1 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Rtl3Q6P1Y1 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Rtl3Q6P1Y1 AW822252-206ENSMUST00000208904 237 ntBASIC16.49■□□□□ 0.23
Rtl3Q6P1Y1 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rtl3Q6P1Y1 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Rtl3Q6P1Y1 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rtl3Q6P1Y1 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rtl3Q6P1Y1 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rtl3Q6P1Y1 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Rtl3Q6P1Y1 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rtl3Q6P1Y1 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rtl3Q6P1Y1 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rtl3Q6P1Y1 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 57.5 ms