Protein–RNA interactions for Protein: Q6A078

Cep290, Centrosomal protein of 290 kDa, mousemouse

Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cep290Q6A078 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cep290Q6A078 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Cep290Q6A078 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cep290Q6A078 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC16.32■□□□□ 0.2
Cep290Q6A078 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Cep290Q6A078 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Cep290Q6A078 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cep290Q6A078 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cep290Q6A078 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cep290Q6A078 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC16.31■□□□□ 0.2
Cep290Q6A078 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC16.31■□□□□ 0.2
Cep290Q6A078 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cep290Q6A078 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cep290Q6A078 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Cep290Q6A078 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cep290Q6A078 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cep290Q6A078 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC16.31■□□□□ 0.2
Cep290Q6A078 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Cep290Q6A078 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Cep290Q6A078 Gm18489-201ENSMUST00000172565 551 ntBASIC16.31■□□□□ 0.2
Cep290Q6A078 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cep290Q6A078 Gm18057-201ENSMUST00000208220 503 ntBASIC16.31■□□□□ 0.2
Cep290Q6A078 AC155729.1-201ENSMUST00000227758 544 ntBASIC16.31■□□□□ 0.2
Cep290Q6A078 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cep290Q6A078 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cep290Q6A078 Gm13294-201ENSMUST00000121757 1330 ntBASIC16.31■□□□□ 0.2
Cep290Q6A078 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cep290Q6A078 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC16.31■□□□□ 0.2
Cep290Q6A078 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cep290Q6A078 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cep290Q6A078 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cep290Q6A078 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cep290Q6A078 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cep290Q6A078 Gm12151-201ENSMUST00000121374 290 ntBASIC16.3■□□□□ 0.2
Cep290Q6A078 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC16.3■□□□□ 0.2
Cep290Q6A078 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cep290Q6A078 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Cep290Q6A078 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cep290Q6A078 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cep290Q6A078 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cep290Q6A078 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cep290Q6A078 Gm13453-201ENSMUST00000118708 357 ntBASIC16.3■□□□□ 0.2
Cep290Q6A078 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Cep290Q6A078 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Cep290Q6A078 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Cep290Q6A078 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Cep290Q6A078 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cep290Q6A078 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cep290Q6A078 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cep290Q6A078 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Cep290Q6A078 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cep290Q6A078 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC16.29■□□□□ 0.2
Cep290Q6A078 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC16.29■□□□□ 0.2
Cep290Q6A078 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Cep290Q6A078 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Cep290Q6A078 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC16.29■□□□□ 0.2
Cep290Q6A078 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Cep290Q6A078 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC16.29■□□□□ 0.2
Cep290Q6A078 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cep290Q6A078 Gm43808-201ENSMUST00000202534 2065 ntBASIC16.29■□□□□ 0.2
Cep290Q6A078 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cep290Q6A078 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Cep290Q6A078 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
Cep290Q6A078 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Cep290Q6A078 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cep290Q6A078 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
Cep290Q6A078 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cep290Q6A078 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC16.29■□□□□ 0.2
Cep290Q6A078 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cep290Q6A078 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cep290Q6A078 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cep290Q6A078 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cep290Q6A078 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cep290Q6A078 Gm37277-201ENSMUST00000194052 1111 ntBASIC16.28■□□□□ 0.2
Cep290Q6A078 Gm9682-201ENSMUST00000197505 556 ntBASIC16.28■□□□□ 0.2
Cep290Q6A078 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Cep290Q6A078 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Cep290Q6A078 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cep290Q6A078 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cep290Q6A078 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Cep290Q6A078 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Cep290Q6A078 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cep290Q6A078 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Cep290Q6A078 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Cep290Q6A078 Gm10253-201ENSMUST00000194270 940 ntBASIC16.28■□□□□ 0.2
Cep290Q6A078 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Cep290Q6A078 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cep290Q6A078 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cep290Q6A078 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cep290Q6A078 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cep290Q6A078 Gm6018-201ENSMUST00000216090 1306 ntBASIC16.27■□□□□ 0.2
Cep290Q6A078 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cep290Q6A078 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Cep290Q6A078 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC16.27■□□□□ 0.2
Cep290Q6A078 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC16.27■□□□□ 0.2
Cep290Q6A078 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cep290Q6A078 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cep290Q6A078 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cep290Q6A078 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cep290Q6A078 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms