Protein–RNA interactions for Protein: Q64739

Col11a2, Collagen alpha-2(XI) chain, mousemouse

Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a2Q64739 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC19.27■□□□□ 0.68
Col11a2Q64739 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
Col11a2Q64739 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
Col11a2Q64739 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC19.27■□□□□ 0.68
Col11a2Q64739 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Col11a2Q64739 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Col11a2Q64739 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Col11a2Q64739 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Col11a2Q64739 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Col11a2Q64739 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Col11a2Q64739 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC19.26■□□□□ 0.67
Col11a2Q64739 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Col11a2Q64739 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Col11a2Q64739 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC19.26■□□□□ 0.67
Col11a2Q64739 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Col11a2Q64739 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC19.26■□□□□ 0.67
Col11a2Q64739 Gm5779-201ENSMUST00000218467 910 ntBASIC19.26■□□□□ 0.67
Col11a2Q64739 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC19.26■□□□□ 0.67
Col11a2Q64739 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Col11a2Q64739 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Col11a2Q64739 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC19.26■□□□□ 0.67
Col11a2Q64739 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Col11a2Q64739 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC19.26■□□□□ 0.67
Col11a2Q64739 Gm15693-201ENSMUST00000120470 637 ntBASIC19.25■□□□□ 0.67
Col11a2Q64739 CT030684.1-201ENSMUST00000227292 914 ntBASIC19.25■□□□□ 0.67
Col11a2Q64739 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Col11a2Q64739 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Col11a2Q64739 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Col11a2Q64739 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Col11a2Q64739 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Col11a2Q64739 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC19.25■□□□□ 0.67
Col11a2Q64739 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Col11a2Q64739 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Col11a2Q64739 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC19.25■□□□□ 0.67
Col11a2Q64739 Gm7286-201ENSMUST00000182691 1007 ntBASIC19.25■□□□□ 0.67
Col11a2Q64739 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Col11a2Q64739 Gm13410-201ENSMUST00000117058 1415 ntBASIC19.24■□□□□ 0.67
Col11a2Q64739 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Col11a2Q64739 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Col11a2Q64739 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
Col11a2Q64739 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Col11a2Q64739 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC19.24■□□□□ 0.67
Col11a2Q64739 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Col11a2Q64739 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Col11a2Q64739 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Col11a2Q64739 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Col11a2Q64739 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC19.24■□□□□ 0.67
Col11a2Q64739 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Col11a2Q64739 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Col11a2Q64739 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC19.24■□□□□ 0.67
Col11a2Q64739 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC19.24■□□□□ 0.67
Col11a2Q64739 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC19.24■□□□□ 0.67
Col11a2Q64739 Gm24158-201ENSMUST00000175263 71 ntBASIC19.24■□□□□ 0.67
Col11a2Q64739 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Col11a2Q64739 Gm27618-201ENSMUST00000183671 60 ntBASIC19.24■□□□□ 0.67
Col11a2Q64739 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC19.24■□□□□ 0.67
Col11a2Q64739 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Col11a2Q64739 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC19.24■□□□□ 0.67
Col11a2Q64739 Gm10154-201ENSMUST00000084445 354 ntBASIC19.24■□□□□ 0.67
Col11a2Q64739 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Col11a2Q64739 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Col11a2Q64739 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Col11a2Q64739 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Col11a2Q64739 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Col11a2Q64739 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Col11a2Q64739 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Col11a2Q64739 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Col11a2Q64739 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Col11a2Q64739 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Col11a2Q64739 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Col11a2Q64739 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Col11a2Q64739 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Col11a2Q64739 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Col11a2Q64739 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Col11a2Q64739 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Col11a2Q64739 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Col11a2Q64739 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Col11a2Q64739 Gtpbp10-211ENSMUST00000198799 648 ntBASIC19.22■□□□□ 0.67
Col11a2Q64739 AC025913.2-201ENSMUST00000220136 1766 ntBASIC19.22■□□□□ 0.67
Col11a2Q64739 AC159621.2-201ENSMUST00000223519 1326 ntBASIC19.22■□□□□ 0.67
Col11a2Q64739 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Col11a2Q64739 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
Col11a2Q64739 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Col11a2Q64739 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Col11a2Q64739 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Col11a2Q64739 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC19.22■□□□□ 0.67
Col11a2Q64739 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Col11a2Q64739 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Col11a2Q64739 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Col11a2Q64739 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Col11a2Q64739 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Col11a2Q64739 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC19.22■□□□□ 0.67
Col11a2Q64739 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Col11a2Q64739 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Col11a2Q64739 Gm18057-201ENSMUST00000208220 503 ntBASIC19.22■□□□□ 0.67
Col11a2Q64739 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC19.22■□□□□ 0.67
Col11a2Q64739 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Col11a2Q64739 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Col11a2Q64739 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Col11a2Q64739 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms