Protein–RNA interactions for Protein: Q63829

Commd3, COMM domain-containing protein 3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Commd3Q63829 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Commd3Q63829 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
Commd3Q63829 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Commd3Q63829 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
Commd3Q63829 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Commd3Q63829 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Commd3Q63829 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC13.39□□□□□ -0.27
Commd3Q63829 Gm9694-201ENSMUST00000193347 1189 ntBASIC13.39□□□□□ -0.27
Commd3Q63829 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Commd3Q63829 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Commd3Q63829 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Commd3Q63829 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC13.39□□□□□ -0.27
Commd3Q63829 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Commd3Q63829 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Commd3Q63829 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Commd3Q63829 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Commd3Q63829 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC13.39□□□□□ -0.27
Commd3Q63829 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Commd3Q63829 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Commd3Q63829 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Commd3Q63829 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Commd3Q63829 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Commd3Q63829 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Commd3Q63829 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Commd3Q63829 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Commd3Q63829 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC13.38□□□□□ -0.27
Commd3Q63829 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
Commd3Q63829 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Commd3Q63829 Gm27000-201ENSMUST00000182943 842 ntBASIC13.38□□□□□ -0.27
Commd3Q63829 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Commd3Q63829 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Commd3Q63829 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Commd3Q63829 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Commd3Q63829 Gm5874-201ENSMUST00000096101 508 ntBASIC13.38□□□□□ -0.27
Commd3Q63829 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Commd3Q63829 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Commd3Q63829 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Commd3Q63829 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Commd3Q63829 Gm43598-201ENSMUST00000202482 2479 ntBASIC13.38□□□□□ -0.27
Commd3Q63829 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Commd3Q63829 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Commd3Q63829 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Commd3Q63829 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Commd3Q63829 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Commd3Q63829 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Commd3Q63829 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Commd3Q63829 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Commd3Q63829 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Commd3Q63829 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Commd3Q63829 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Commd3Q63829 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC13.37□□□□□ -0.27
Commd3Q63829 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Commd3Q63829 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Commd3Q63829 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Commd3Q63829 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
Commd3Q63829 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Commd3Q63829 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Commd3Q63829 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Commd3Q63829 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Commd3Q63829 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Commd3Q63829 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Commd3Q63829 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Commd3Q63829 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Commd3Q63829 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Commd3Q63829 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC13.37□□□□□ -0.27
Commd3Q63829 Gm13148-201ENSMUST00000118892 745 ntBASIC13.37□□□□□ -0.27
Commd3Q63829 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC13.37□□□□□ -0.27
Commd3Q63829 Gm17661-201ENSMUST00000170317 270 ntBASIC13.37□□□□□ -0.27
Commd3Q63829 Gm42545-201ENSMUST00000202755 922 ntBASIC13.37□□□□□ -0.27
Commd3Q63829 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Commd3Q63829 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Commd3Q63829 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC13.37□□□□□ -0.27
Commd3Q63829 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Commd3Q63829 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Commd3Q63829 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Commd3Q63829 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Commd3Q63829 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Commd3Q63829 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Commd3Q63829 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Commd3Q63829 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Commd3Q63829 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Commd3Q63829 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Commd3Q63829 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
Commd3Q63829 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Commd3Q63829 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Commd3Q63829 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Commd3Q63829 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Commd3Q63829 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Commd3Q63829 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Commd3Q63829 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Commd3Q63829 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Commd3Q63829 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC13.36□□□□□ -0.27
Commd3Q63829 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Commd3Q63829 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
Commd3Q63829 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC13.36□□□□□ -0.27
Commd3Q63829 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC13.36□□□□□ -0.27
Commd3Q63829 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC13.36□□□□□ -0.27
Commd3Q63829 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Commd3Q63829 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Commd3Q63829 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms