Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Gm24659-201ENSMUST00000180212 110 ntBASIC18.73■□□□□ 0.59
Scn9aQ62205 Gm24169-201ENSMUST00000180244 110 ntBASIC18.73■□□□□ 0.59
Scn9aQ62205 Gm23689-201ENSMUST00000180354 110 ntBASIC18.73■□□□□ 0.59
Scn9aQ62205 Gm27359-201ENSMUST00000184153 110 ntBASIC18.73■□□□□ 0.59
Scn9aQ62205 Gm27785-201ENSMUST00000184268 110 ntBASIC18.73■□□□□ 0.59
Scn9aQ62205 Gm27466-201ENSMUST00000184396 110 ntBASIC18.73■□□□□ 0.59
Scn9aQ62205 Gm27703-201ENSMUST00000184836 110 ntBASIC18.73■□□□□ 0.59
Scn9aQ62205 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC18.73■□□□□ 0.59
Scn9aQ62205 Gm18246-201ENSMUST00000221023 728 ntBASIC18.73■□□□□ 0.59
Scn9aQ62205 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Scn9aQ62205 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Scn9aQ62205 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Scn9aQ62205 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Scn9aQ62205 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Scn9aQ62205 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Scn9aQ62205 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC18.73■□□□□ 0.59
Scn9aQ62205 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC18.73■□□□□ 0.59
Scn9aQ62205 Gm22175-201ENSMUST00000175007 78 ntBASIC18.73■□□□□ 0.59
Scn9aQ62205 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Scn9aQ62205 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Scn9aQ62205 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Scn9aQ62205 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Scn9aQ62205 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Scn9aQ62205 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Scn9aQ62205 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC18.73■□□□□ 0.59
Scn9aQ62205 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Scn9aQ62205 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Scn9aQ62205 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Scn9aQ62205 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
Scn9aQ62205 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC18.72■□□□□ 0.59
Scn9aQ62205 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC18.72■□□□□ 0.59
Scn9aQ62205 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Scn9aQ62205 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Scn9aQ62205 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Scn9aQ62205 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Scn9aQ62205 Nudt18-203ENSMUST00000228768 1578 ntBASIC18.72■□□□□ 0.59
Scn9aQ62205 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Scn9aQ62205 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Scn9aQ62205 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Scn9aQ62205 Gm7336-201ENSMUST00000107041 1232 ntBASIC18.72■□□□□ 0.59
Scn9aQ62205 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Scn9aQ62205 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC18.72■□□□□ 0.59
Scn9aQ62205 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Scn9aQ62205 Hist1h2al-201ENSMUST00000091708 339 ntBASIC18.72■□□□□ 0.59
Scn9aQ62205 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
Scn9aQ62205 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Scn9aQ62205 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Scn9aQ62205 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Scn9aQ62205 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
Scn9aQ62205 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Scn9aQ62205 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Scn9aQ62205 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Scn9aQ62205 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Scn9aQ62205 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Scn9aQ62205 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Scn9aQ62205 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Scn9aQ62205 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Scn9aQ62205 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Scn9aQ62205 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC18.71■□□□□ 0.59
Scn9aQ62205 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.58
Scn9aQ62205 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Scn9aQ62205 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Scn9aQ62205 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Scn9aQ62205 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Scn9aQ62205 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
Scn9aQ62205 Gm15635-204ENSMUST00000208024 2539 ntBASIC18.7■□□□□ 0.58
Scn9aQ62205 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Scn9aQ62205 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Scn9aQ62205 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Scn9aQ62205 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Scn9aQ62205 Wnt10b-206ENSMUST00000228546 2709 ntBASIC18.7■□□□□ 0.58
Scn9aQ62205 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Scn9aQ62205 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Scn9aQ62205 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Scn9aQ62205 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Scn9aQ62205 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Scn9aQ62205 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Scn9aQ62205 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC18.7■□□□□ 0.58
Scn9aQ62205 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Scn9aQ62205 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Scn9aQ62205 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
Scn9aQ62205 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Scn9aQ62205 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Scn9aQ62205 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Scn9aQ62205 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Scn9aQ62205 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Scn9aQ62205 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Scn9aQ62205 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC18.69■□□□□ 0.58
Scn9aQ62205 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Scn9aQ62205 Mir6977-201ENSMUST00000184960 64 ntBASIC18.69■□□□□ 0.58
Scn9aQ62205 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC18.69■□□□□ 0.58
Scn9aQ62205 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Scn9aQ62205 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Scn9aQ62205 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Scn9aQ62205 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Scn9aQ62205 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Scn9aQ62205 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Scn9aQ62205 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Scn9aQ62205 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC18.69■□□□□ 0.58
Scn9aQ62205 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms