Protein–RNA interactions for Protein: Q62018

Ctr9, RNA polymerase-associated protein CTR9 homolog, mousemouse

Known RBP Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9Q62018 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ctr9Q62018 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ctr9Q62018 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ctr9Q62018 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Ctr9Q62018 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ctr9Q62018 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Ctr9Q62018 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Ctr9Q62018 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Ctr9Q62018 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC18.82■□□□□ 0.6
Ctr9Q62018 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Ctr9Q62018 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Ctr9Q62018 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC18.82■□□□□ 0.6
Ctr9Q62018 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Ctr9Q62018 Gm9172-201ENSMUST00000212092 954 ntBASIC18.82■□□□□ 0.6
Ctr9Q62018 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ctr9Q62018 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC18.82■□□□□ 0.6
Ctr9Q62018 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ctr9Q62018 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
Ctr9Q62018 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ctr9Q62018 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ctr9Q62018 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ctr9Q62018 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ctr9Q62018 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
Ctr9Q62018 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ctr9Q62018 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ctr9Q62018 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ctr9Q62018 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ctr9Q62018 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC18.81■□□□□ 0.6
Ctr9Q62018 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ctr9Q62018 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ctr9Q62018 Gm12497-201ENSMUST00000138778 237 ntBASIC18.81■□□□□ 0.6
Ctr9Q62018 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ctr9Q62018 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC18.81■□□□□ 0.6
Ctr9Q62018 AC161829.1-201ENSMUST00000220298 281 ntBASIC18.81■□□□□ 0.6
Ctr9Q62018 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ctr9Q62018 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ctr9Q62018 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ctr9Q62018 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Ctr9Q62018 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ctr9Q62018 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ctr9Q62018 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ctr9Q62018 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ctr9Q62018 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ctr9Q62018 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ctr9Q62018 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Ctr9Q62018 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ctr9Q62018 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Ctr9Q62018 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ctr9Q62018 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ctr9Q62018 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ctr9Q62018 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Ctr9Q62018 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC18.8■□□□□ 0.6
Ctr9Q62018 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Ctr9Q62018 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC18.8■□□□□ 0.6
Ctr9Q62018 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC18.8■□□□□ 0.6
Ctr9Q62018 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ctr9Q62018 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ctr9Q62018 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ctr9Q62018 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ctr9Q62018 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ctr9Q62018 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ctr9Q62018 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Ctr9Q62018 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Ctr9Q62018 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ctr9Q62018 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ctr9Q62018 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Ctr9Q62018 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ctr9Q62018 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ctr9Q62018 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ctr9Q62018 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ctr9Q62018 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ctr9Q62018 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ctr9Q62018 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Ctr9Q62018 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ctr9Q62018 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ctr9Q62018 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC18.79■□□□□ 0.6
Ctr9Q62018 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC18.79■□□□□ 0.6
Ctr9Q62018 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ctr9Q62018 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ctr9Q62018 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC18.79■□□□□ 0.6
Ctr9Q62018 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
Ctr9Q62018 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ctr9Q62018 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ctr9Q62018 Gm18856-201ENSMUST00000178096 1374 ntBASIC18.79■□□□□ 0.6
Ctr9Q62018 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ctr9Q62018 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ctr9Q62018 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ctr9Q62018 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ctr9Q62018 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Ctr9Q62018 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC18.78■□□□□ 0.6
Ctr9Q62018 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Ctr9Q62018 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ctr9Q62018 Gm44771-201ENSMUST00000206975 626 ntBASIC18.78■□□□□ 0.6
Ctr9Q62018 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Ctr9Q62018 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ctr9Q62018 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC18.78■□□□□ 0.6
Ctr9Q62018 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ctr9Q62018 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ctr9Q62018 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ctr9Q62018 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms