Protein–RNA interactions for Protein: Q61818

Rai1, Retinoic acid-induced protein 1, mousemouse

Predictions only

Length 1,889 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rai1Q61818 Gm27301-201ENSMUST00000184012 127 ntBASIC15.33■□□□□ 0.05
Rai1Q61818 Gm44872-201ENSMUST00000207864 420 ntBASIC15.33■□□□□ 0.05
Rai1Q61818 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Rai1Q61818 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Rai1Q61818 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rai1Q61818 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Rai1Q61818 Gm13294-201ENSMUST00000121757 1330 ntBASIC15.33■□□□□ 0.04
Rai1Q61818 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rai1Q61818 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rai1Q61818 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rai1Q61818 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rai1Q61818 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rai1Q61818 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rai1Q61818 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Rai1Q61818 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rai1Q61818 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rai1Q61818 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rai1Q61818 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Rai1Q61818 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rai1Q61818 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rai1Q61818 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rai1Q61818 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rai1Q61818 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rai1Q61818 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rai1Q61818 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rai1Q61818 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
Rai1Q61818 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rai1Q61818 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Rai1Q61818 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC15.32■□□□□ 0.04
Rai1Q61818 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Rai1Q61818 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC15.32■□□□□ 0.04
Rai1Q61818 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rai1Q61818 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC15.32■□□□□ 0.04
Rai1Q61818 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rai1Q61818 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Rai1Q61818 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rai1Q61818 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Rai1Q61818 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rai1Q61818 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rai1Q61818 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rai1Q61818 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Rai1Q61818 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rai1Q61818 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rai1Q61818 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rai1Q61818 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Rai1Q61818 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rai1Q61818 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rai1Q61818 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Rai1Q61818 Gm14057-201ENSMUST00000120631 482 ntBASIC15.31■□□□□ 0.04
Rai1Q61818 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rai1Q61818 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Rai1Q61818 Gm27321-201ENSMUST00000185021 205 ntBASIC15.31■□□□□ 0.04
Rai1Q61818 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC15.31■□□□□ 0.04
Rai1Q61818 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC15.31■□□□□ 0.04
Rai1Q61818 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Rai1Q61818 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rai1Q61818 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rai1Q61818 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rai1Q61818 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Rai1Q61818 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rai1Q61818 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rai1Q61818 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Rai1Q61818 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rai1Q61818 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
Rai1Q61818 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rai1Q61818 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rai1Q61818 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rai1Q61818 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rai1Q61818 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Rai1Q61818 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rai1Q61818 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rai1Q61818 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC15.31■□□□□ 0.04
Rai1Q61818 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rai1Q61818 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rai1Q61818 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC15.31■□□□□ 0.04
Rai1Q61818 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
Rai1Q61818 AC127302.2-201ENSMUST00000215212 268 ntBASIC15.31■□□□□ 0.04
Rai1Q61818 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rai1Q61818 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
Rai1Q61818 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Rai1Q61818 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Rai1Q61818 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rai1Q61818 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Rai1Q61818 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Rai1Q61818 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
Rai1Q61818 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rai1Q61818 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rai1Q61818 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC15.3■□□□□ 0.04
Rai1Q61818 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rai1Q61818 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Rai1Q61818 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Rai1Q61818 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC15.3■□□□□ 0.04
Rai1Q61818 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rai1Q61818 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rai1Q61818 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC15.3■□□□□ 0.04
Rai1Q61818 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rai1Q61818 Gm45774-201ENSMUST00000211992 2665 ntBASIC15.3■□□□□ 0.04
Rai1Q61818 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
Rai1Q61818 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
Rai1Q61818 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms