Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Foxc1Q61572 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Foxc1Q61572 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Foxc1Q61572 Mir770-201ENSMUST00000103252 94 ntBASIC11.78□□□□□ -0.52
Foxc1Q61572 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC11.78□□□□□ -0.52
Foxc1Q61572 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Foxc1Q61572 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC11.78□□□□□ -0.52
Foxc1Q61572 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Foxc1Q61572 Gm20618-202ENSMUST00000177482 1227 ntTSL 3 BASIC11.78□□□□□ -0.52
Foxc1Q61572 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Foxc1Q61572 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Foxc1Q61572 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC11.78□□□□□ -0.52
Foxc1Q61572 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Foxc1Q61572 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Foxc1Q61572 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Foxc1Q61572 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Foxc1Q61572 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Foxc1Q61572 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Foxc1Q61572 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Foxc1Q61572 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Foxc1Q61572 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Foxc1Q61572 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC11.78□□□□□ -0.52
Foxc1Q61572 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC11.78□□□□□ -0.52
Foxc1Q61572 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Foxc1Q61572 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Foxc1Q61572 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Foxc1Q61572 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Foxc1Q61572 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Foxc1Q61572 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Foxc1Q61572 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Foxc1Q61572 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Foxc1Q61572 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Foxc1Q61572 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Foxc1Q61572 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC11.77□□□□□ -0.53
Foxc1Q61572 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Foxc1Q61572 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Foxc1Q61572 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Foxc1Q61572 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Foxc1Q61572 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC11.77□□□□□ -0.53
Foxc1Q61572 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC11.77□□□□□ -0.53
Foxc1Q61572 Gm17872-201ENSMUST00000222550 532 ntBASIC11.77□□□□□ -0.53
Foxc1Q61572 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Foxc1Q61572 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Foxc1Q61572 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Foxc1Q61572 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Foxc1Q61572 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Foxc1Q61572 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Foxc1Q61572 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Foxc1Q61572 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Foxc1Q61572 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Foxc1Q61572 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC11.77□□□□□ -0.53
Foxc1Q61572 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC11.77□□□□□ -0.53
Foxc1Q61572 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Foxc1Q61572 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC11.77□□□□□ -0.53
Foxc1Q61572 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC11.77□□□□□ -0.53
Foxc1Q61572 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Foxc1Q61572 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Foxc1Q61572 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Foxc1Q61572 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Foxc1Q61572 Gfra2-202ENSMUST00000227633 1480 ntBASIC11.76□□□□□ -0.53
Foxc1Q61572 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC11.76□□□□□ -0.53
Foxc1Q61572 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Foxc1Q61572 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Foxc1Q61572 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Foxc1Q61572 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Foxc1Q61572 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Foxc1Q61572 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Foxc1Q61572 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Foxc1Q61572 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Foxc1Q61572 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Foxc1Q61572 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Foxc1Q61572 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
Foxc1Q61572 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Foxc1Q61572 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Foxc1Q61572 Gm7153-201ENSMUST00000117092 455 ntBASIC11.76□□□□□ -0.53
Foxc1Q61572 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC11.76□□□□□ -0.53
Foxc1Q61572 Gm45328-201ENSMUST00000210942 917 ntBASIC11.76□□□□□ -0.53
Foxc1Q61572 AC159246.1-201ENSMUST00000214478 249 ntBASIC11.76□□□□□ -0.53
Foxc1Q61572 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC11.76□□□□□ -0.53
Foxc1Q61572 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Foxc1Q61572 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Foxc1Q61572 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Foxc1Q61572 Mrgpra4-201ENSMUST00000087092 1259 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Foxc1Q61572 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Foxc1Q61572 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Foxc1Q61572 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Foxc1Q61572 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Foxc1Q61572 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Foxc1Q61572 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Foxc1Q61572 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Foxc1Q61572 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Foxc1Q61572 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Foxc1Q61572 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Foxc1Q61572 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Foxc1Q61572 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Foxc1Q61572 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Foxc1Q61572 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Foxc1Q61572 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Foxc1Q61572 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Foxc1Q61572 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms