Protein–RNA interactions for Protein: Q61466

Smarcd1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, mousemouse

Known RBP Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd1Q61466 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Smarcd1Q61466 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smarcd1Q61466 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Smarcd1Q61466 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Smarcd1Q61466 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smarcd1Q61466 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smarcd1Q61466 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smarcd1Q61466 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Smarcd1Q61466 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smarcd1Q61466 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smarcd1Q61466 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Smarcd1Q61466 Gm4609-201ENSMUST00000106443 1002 ntBASIC16.64■□□□□ 0.25
Smarcd1Q61466 Gm5138-201ENSMUST00000113842 1002 ntBASIC16.64■□□□□ 0.25
Smarcd1Q61466 Gm15191-201ENSMUST00000117933 1000 ntBASIC16.64■□□□□ 0.25
Smarcd1Q61466 Gm12182-201ENSMUST00000118655 1008 ntBASIC16.64■□□□□ 0.25
Smarcd1Q61466 Gm13882-201ENSMUST00000120886 1002 ntBASIC16.64■□□□□ 0.25
Smarcd1Q61466 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Smarcd1Q61466 Gm10284-201ENSMUST00000145057 1005 ntBASIC16.64■□□□□ 0.25
Smarcd1Q61466 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Smarcd1Q61466 Gm10481-201ENSMUST00000179228 1002 ntBASIC16.64■□□□□ 0.25
Smarcd1Q61466 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC16.64■□□□□ 0.25
Smarcd1Q61466 Gm2574-201ENSMUST00000181051 1002 ntBASIC16.64■□□□□ 0.25
Smarcd1Q61466 Gm3200-201ENSMUST00000181493 1002 ntBASIC16.64■□□□□ 0.25
Smarcd1Q61466 Gm8825-201ENSMUST00000182565 998 ntBASIC16.64■□□□□ 0.25
Smarcd1Q61466 Gm4518-201ENSMUST00000182638 718 ntBASIC16.64■□□□□ 0.25
Smarcd1Q61466 Gm8330-201ENSMUST00000182754 1008 ntBASIC16.64■□□□□ 0.25
Smarcd1Q61466 Gm4575-201ENSMUST00000182991 1002 ntBASIC16.64■□□□□ 0.25
Smarcd1Q61466 Gm8709-201ENSMUST00000183230 1012 ntBASIC16.64■□□□□ 0.25
Smarcd1Q61466 AC161829.1-201ENSMUST00000220298 281 ntBASIC16.64■□□□□ 0.25
Smarcd1Q61466 AC133598.3-202ENSMUST00000224219 531 ntBASIC16.64■□□□□ 0.25
Smarcd1Q61466 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Smarcd1Q61466 Gm10293-201ENSMUST00000076317 1002 ntBASIC16.64■□□□□ 0.25
Smarcd1Q61466 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC16.64■□□□□ 0.25
Smarcd1Q61466 Gm6316-201ENSMUST00000082064 1020 ntBASIC16.64■□□□□ 0.25
Smarcd1Q61466 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smarcd1Q61466 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Smarcd1Q61466 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smarcd1Q61466 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC16.64■□□□□ 0.25
Smarcd1Q61466 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Smarcd1Q61466 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Smarcd1Q61466 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smarcd1Q61466 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smarcd1Q61466 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC16.64■□□□□ 0.25
Smarcd1Q61466 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smarcd1Q61466 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Smarcd1Q61466 Gm18856-201ENSMUST00000178096 1374 ntBASIC16.64■□□□□ 0.25
Smarcd1Q61466 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smarcd1Q61466 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Smarcd1Q61466 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Smarcd1Q61466 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC16.63■□□□□ 0.25
Smarcd1Q61466 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Smarcd1Q61466 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Smarcd1Q61466 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Smarcd1Q61466 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Smarcd1Q61466 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Smarcd1Q61466 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Smarcd1Q61466 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC16.63■□□□□ 0.25
Smarcd1Q61466 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
Smarcd1Q61466 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC16.63■□□□□ 0.25
Smarcd1Q61466 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Smarcd1Q61466 Gm6257-201ENSMUST00000163864 910 ntBASIC16.63■□□□□ 0.25
Smarcd1Q61466 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Smarcd1Q61466 Gm18195-201ENSMUST00000207604 706 ntBASIC16.63■□□□□ 0.25
Smarcd1Q61466 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC16.63■□□□□ 0.25
Smarcd1Q61466 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC16.63■□□□□ 0.25
Smarcd1Q61466 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Smarcd1Q61466 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC16.63■□□□□ 0.25
Smarcd1Q61466 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Smarcd1Q61466 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Smarcd1Q61466 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Smarcd1Q61466 Rbfox2-206ENSMUST00000227314 1810 ntBASIC16.63■□□□□ 0.25
Smarcd1Q61466 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Smarcd1Q61466 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC16.63■□□□□ 0.25
Smarcd1Q61466 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Smarcd1Q61466 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Smarcd1Q61466 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Smarcd1Q61466 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Smarcd1Q61466 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
Smarcd1Q61466 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Smarcd1Q61466 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Smarcd1Q61466 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Smarcd1Q61466 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Smarcd1Q61466 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Smarcd1Q61466 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Smarcd1Q61466 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Smarcd1Q61466 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Smarcd1Q61466 Gm7862-201ENSMUST00000121461 292 ntBASIC16.62■□□□□ 0.25
Smarcd1Q61466 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC16.62■□□□□ 0.25
Smarcd1Q61466 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Smarcd1Q61466 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC16.62■□□□□ 0.25
Smarcd1Q61466 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC16.62■□□□□ 0.25
Smarcd1Q61466 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC16.62■□□□□ 0.25
Smarcd1Q61466 Gm37584-201ENSMUST00000193595 1290 ntBASIC16.62■□□□□ 0.25
Smarcd1Q61466 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Smarcd1Q61466 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Smarcd1Q61466 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Smarcd1Q61466 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Smarcd1Q61466 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Smarcd1Q61466 Gm8784-201ENSMUST00000222096 1435 ntBASIC16.62■□□□□ 0.25
Smarcd1Q61466 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms