Protein–RNA interactions for Protein: Q61457

Ccne1, G1/S-specific cyclin-E1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccne1Q61457 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ccne1Q61457 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Ccne1Q61457 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Ccne1Q61457 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Ccne1Q61457 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ccne1Q61457 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ccne1Q61457 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC20.76■□□□□ 0.91
Ccne1Q61457 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ccne1Q61457 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ccne1Q61457 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ccne1Q61457 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ccne1Q61457 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Ccne1Q61457 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ccne1Q61457 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ccne1Q61457 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC20.75■□□□□ 0.91
Ccne1Q61457 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
Ccne1Q61457 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Ccne1Q61457 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ccne1Q61457 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ccne1Q61457 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ccne1Q61457 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ccne1Q61457 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC20.75■□□□□ 0.91
Ccne1Q61457 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Ccne1Q61457 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC20.75■□□□□ 0.91
Ccne1Q61457 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Ccne1Q61457 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Ccne1Q61457 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Ccne1Q61457 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Ccne1Q61457 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC20.75■□□□□ 0.91
Ccne1Q61457 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ccne1Q61457 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Ccne1Q61457 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ccne1Q61457 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Ccne1Q61457 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Ccne1Q61457 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ccne1Q61457 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Ccne1Q61457 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Ccne1Q61457 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC20.75■□□□□ 0.91
Ccne1Q61457 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Ccne1Q61457 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ccne1Q61457 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC20.74■□□□□ 0.91
Ccne1Q61457 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ccne1Q61457 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ccne1Q61457 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ccne1Q61457 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ccne1Q61457 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ccne1Q61457 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Ccne1Q61457 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Ccne1Q61457 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC20.74■□□□□ 0.91
Ccne1Q61457 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ccne1Q61457 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
Ccne1Q61457 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ccne1Q61457 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ccne1Q61457 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ccne1Q61457 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Ccne1Q61457 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Ccne1Q61457 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ccne1Q61457 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ccne1Q61457 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Ccne1Q61457 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ccne1Q61457 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ccne1Q61457 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Ccne1Q61457 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ccne1Q61457 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC20.73■□□□□ 0.91
Ccne1Q61457 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ccne1Q61457 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC20.73■□□□□ 0.91
Ccne1Q61457 Gm5253-201ENSMUST00000187104 1025 ntBASIC20.73■□□□□ 0.91
Ccne1Q61457 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ccne1Q61457 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Ccne1Q61457 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Ccne1Q61457 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ccne1Q61457 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ccne1Q61457 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Ccne1Q61457 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ccne1Q61457 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Ccne1Q61457 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Ccne1Q61457 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ccne1Q61457 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ccne1Q61457 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ccne1Q61457 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ccne1Q61457 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ccne1Q61457 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ccne1Q61457 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ccne1Q61457 Gm26308-201ENSMUST00000157768 69 ntBASIC20.72■□□□□ 0.91
Ccne1Q61457 Gm15500-202ENSMUST00000071641 1019 ntBASIC20.72■□□□□ 0.91
Ccne1Q61457 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ccne1Q61457 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Ccne1Q61457 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ccne1Q61457 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ccne1Q61457 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ccne1Q61457 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ccne1Q61457 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ccne1Q61457 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ccne1Q61457 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Ccne1Q61457 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ccne1Q61457 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Ccne1Q61457 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ccne1Q61457 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ccne1Q61457 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC20.71■□□□□ 0.91
Ccne1Q61457 Gm6257-201ENSMUST00000163864 910 ntBASIC20.71■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms