Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Ift88Q61371 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ift88Q61371 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ift88Q61371 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ift88Q61371 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Ift88Q61371 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ift88Q61371 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ift88Q61371 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ift88Q61371 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ift88Q61371 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
Ift88Q61371 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ift88Q61371 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ift88Q61371 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Ift88Q61371 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC17.74■□□□□ 0.43
Ift88Q61371 AC159205.6-201ENSMUST00000224935 887 ntBASIC17.74■□□□□ 0.43
Ift88Q61371 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ift88Q61371 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ift88Q61371 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ift88Q61371 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
Ift88Q61371 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ift88Q61371 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ift88Q61371 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Ift88Q61371 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ift88Q61371 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ift88Q61371 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Ift88Q61371 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC17.73■□□□□ 0.43
Ift88Q61371 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
Ift88Q61371 Asic1-205ENSMUST00000228185 1818 ntBASIC17.73■□□□□ 0.43
Ift88Q61371 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ift88Q61371 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
Ift88Q61371 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ift88Q61371 Gm20472-201ENSMUST00000174403 1240 ntBASIC17.73■□□□□ 0.43
Ift88Q61371 Gm27011-201ENSMUST00000182352 972 ntBASIC17.73■□□□□ 0.43
Ift88Q61371 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ift88Q61371 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ift88Q61371 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC17.73■□□□□ 0.43
Ift88Q61371 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ift88Q61371 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ift88Q61371 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ift88Q61371 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ift88Q61371 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ift88Q61371 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Ift88Q61371 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ift88Q61371 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ift88Q61371 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
Ift88Q61371 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ift88Q61371 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC17.72■□□□□ 0.43
Ift88Q61371 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ift88Q61371 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ift88Q61371 Gm45212-201ENSMUST00000205831 3403 ntBASIC17.72■□□□□ 0.43
Ift88Q61371 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ift88Q61371 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ift88Q61371 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Ift88Q61371 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Ift88Q61371 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ift88Q61371 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ift88Q61371 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Ift88Q61371 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Ift88Q61371 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ift88Q61371 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Ift88Q61371 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ift88Q61371 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Ift88Q61371 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Ift88Q61371 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC17.72■□□□□ 0.43
Ift88Q61371 AL672049.1-201ENSMUST00000197943 91 ntBASIC17.72■□□□□ 0.43
Ift88Q61371 AC122351.1-201ENSMUST00000220467 126 ntBASIC17.72■□□□□ 0.43
Ift88Q61371 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Ift88Q61371 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Ift88Q61371 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ift88Q61371 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ift88Q61371 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Ift88Q61371 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ift88Q61371 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC17.72■□□□□ 0.43
Ift88Q61371 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ift88Q61371 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Ift88Q61371 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ift88Q61371 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ift88Q61371 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ift88Q61371 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ift88Q61371 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Ift88Q61371 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ift88Q61371 AC163637.1-201ENSMUST00000215491 1894 ntBASIC17.71■□□□□ 0.43
Ift88Q61371 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
Ift88Q61371 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ift88Q61371 Gm38327-201ENSMUST00000195852 1755 ntBASIC17.71■□□□□ 0.43
Ift88Q61371 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC17.71■□□□□ 0.43
Ift88Q61371 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Ift88Q61371 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ift88Q61371 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ift88Q61371 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Ift88Q61371 Gm13559-201ENSMUST00000120476 863 ntBASIC17.71■□□□□ 0.43
Ift88Q61371 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC17.71■□□□□ 0.43
Ift88Q61371 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC17.71■□□□□ 0.43
Ift88Q61371 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Ift88Q61371 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ift88Q61371 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ift88Q61371 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Ift88Q61371 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ift88Q61371 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Ift88Q61371 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms