Protein–RNA interactions for Protein: Q61345

Foxd1, Forkhead box protein D1, mousemouse

Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxd1Q61345 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Foxd1Q61345 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Foxd1Q61345 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Foxd1Q61345 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Foxd1Q61345 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC18.43■□□□□ 0.54
Foxd1Q61345 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC18.43■□□□□ 0.54
Foxd1Q61345 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC18.43■□□□□ 0.54
Foxd1Q61345 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC18.43■□□□□ 0.54
Foxd1Q61345 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC18.43■□□□□ 0.54
Foxd1Q61345 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC18.43■□□□□ 0.54
Foxd1Q61345 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Foxd1Q61345 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Foxd1Q61345 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC18.43■□□□□ 0.54
Foxd1Q61345 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Foxd1Q61345 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Foxd1Q61345 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Foxd1Q61345 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Foxd1Q61345 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Foxd1Q61345 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Foxd1Q61345 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Foxd1Q61345 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Foxd1Q61345 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Foxd1Q61345 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Foxd1Q61345 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Foxd1Q61345 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Foxd1Q61345 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Foxd1Q61345 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Foxd1Q61345 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Foxd1Q61345 Gm5421-201ENSMUST00000181698 2354 ntBASIC18.42■□□□□ 0.54
Foxd1Q61345 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Foxd1Q61345 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Foxd1Q61345 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Foxd1Q61345 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC18.42■□□□□ 0.54
Foxd1Q61345 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Foxd1Q61345 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Foxd1Q61345 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Foxd1Q61345 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Foxd1Q61345 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Foxd1Q61345 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Foxd1Q61345 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC18.41■□□□□ 0.54
Foxd1Q61345 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Foxd1Q61345 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Foxd1Q61345 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Foxd1Q61345 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Foxd1Q61345 Gm29707-201ENSMUST00000196325 491 ntBASIC18.41■□□□□ 0.54
Foxd1Q61345 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC18.41■□□□□ 0.54
Foxd1Q61345 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Foxd1Q61345 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Foxd1Q61345 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Foxd1Q61345 Gm8839-201ENSMUST00000121279 1645 ntBASIC18.41■□□□□ 0.54
Foxd1Q61345 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Foxd1Q61345 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC18.41■□□□□ 0.54
Foxd1Q61345 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Foxd1Q61345 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Foxd1Q61345 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Foxd1Q61345 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Foxd1Q61345 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Foxd1Q61345 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Foxd1Q61345 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Foxd1Q61345 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
Foxd1Q61345 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC18.4■□□□□ 0.54
Foxd1Q61345 AC125206.2-201ENSMUST00000217454 574 ntBASIC18.4■□□□□ 0.54
Foxd1Q61345 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC18.4■□□□□ 0.54
Foxd1Q61345 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Foxd1Q61345 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Foxd1Q61345 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC18.4■□□□□ 0.54
Foxd1Q61345 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Foxd1Q61345 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Foxd1Q61345 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Foxd1Q61345 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Foxd1Q61345 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Foxd1Q61345 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Foxd1Q61345 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Foxd1Q61345 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Foxd1Q61345 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Foxd1Q61345 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Foxd1Q61345 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC18.39■□□□□ 0.53
Foxd1Q61345 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC18.39■□□□□ 0.53
Foxd1Q61345 Gm6912-201ENSMUST00000117218 544 ntBASIC18.39■□□□□ 0.53
Foxd1Q61345 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC18.39■□□□□ 0.53
Foxd1Q61345 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
Foxd1Q61345 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Foxd1Q61345 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
Foxd1Q61345 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Foxd1Q61345 Gm9899-201ENSMUST00000065519 555 ntBASIC18.39■□□□□ 0.53
Foxd1Q61345 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.53
Foxd1Q61345 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Foxd1Q61345 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Foxd1Q61345 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Foxd1Q61345 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Foxd1Q61345 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Foxd1Q61345 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Foxd1Q61345 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Foxd1Q61345 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Foxd1Q61345 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
Foxd1Q61345 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Foxd1Q61345 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Foxd1Q61345 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Foxd1Q61345 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Foxd1Q61345 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms