Protein–RNA interactions for Protein: Q61221

Hif1a, Hypoxia-inducible factor 1-alpha, mousemouse

Known RBP Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hif1aQ61221 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Hif1aQ61221 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Hif1aQ61221 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Hif1aQ61221 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Hif1aQ61221 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Hif1aQ61221 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Hif1aQ61221 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Hif1aQ61221 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Hif1aQ61221 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC16.21■□□□□ 0.19
Hif1aQ61221 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Hif1aQ61221 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
Hif1aQ61221 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Hif1aQ61221 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC16.2■□□□□ 0.18
Hif1aQ61221 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Hif1aQ61221 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Hif1aQ61221 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hif1aQ61221 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hif1aQ61221 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC16.2■□□□□ 0.18
Hif1aQ61221 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hif1aQ61221 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Hif1aQ61221 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Hif1aQ61221 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Hif1aQ61221 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC16.2■□□□□ 0.18
Hif1aQ61221 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC16.2■□□□□ 0.18
Hif1aQ61221 Gm43353-201ENSMUST00000199224 1295 ntBASIC16.2■□□□□ 0.18
Hif1aQ61221 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hif1aQ61221 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hif1aQ61221 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hif1aQ61221 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hif1aQ61221 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Hif1aQ61221 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Hif1aQ61221 AC163637.1-201ENSMUST00000215491 1894 ntBASIC16.2■□□□□ 0.18
Hif1aQ61221 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Hif1aQ61221 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hif1aQ61221 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hif1aQ61221 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Hif1aQ61221 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC16.2■□□□□ 0.18
Hif1aQ61221 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hif1aQ61221 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC16.19■□□□□ 0.18
Hif1aQ61221 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Hif1aQ61221 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Hif1aQ61221 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hif1aQ61221 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hif1aQ61221 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hif1aQ61221 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Hif1aQ61221 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hif1aQ61221 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC16.19■□□□□ 0.18
Hif1aQ61221 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hif1aQ61221 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Hif1aQ61221 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hif1aQ61221 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Hif1aQ61221 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hif1aQ61221 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hif1aQ61221 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hif1aQ61221 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hif1aQ61221 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hif1aQ61221 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC16.18■□□□□ 0.18
Hif1aQ61221 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hif1aQ61221 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Hif1aQ61221 App-207ENSMUST00000227737 2827 ntBASIC16.18■□□□□ 0.18
Hif1aQ61221 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Hif1aQ61221 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hif1aQ61221 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC16.18■□□□□ 0.18
Hif1aQ61221 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hif1aQ61221 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hif1aQ61221 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hif1aQ61221 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hif1aQ61221 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hif1aQ61221 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Hif1aQ61221 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hif1aQ61221 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
Hif1aQ61221 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Hif1aQ61221 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hif1aQ61221 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Hif1aQ61221 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Hif1aQ61221 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC16.18■□□□□ 0.18
Hif1aQ61221 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Hif1aQ61221 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Hif1aQ61221 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC16.18■□□□□ 0.18
Hif1aQ61221 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Hif1aQ61221 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hif1aQ61221 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hif1aQ61221 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hif1aQ61221 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hif1aQ61221 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hif1aQ61221 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Hif1aQ61221 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC16.18■□□□□ 0.18
Hif1aQ61221 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Hif1aQ61221 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hif1aQ61221 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hif1aQ61221 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hif1aQ61221 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hif1aQ61221 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Hif1aQ61221 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC16.17■□□□□ 0.18
Hif1aQ61221 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Hif1aQ61221 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Hif1aQ61221 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hif1aQ61221 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hif1aQ61221 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Hif1aQ61221 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC16.17■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms