Protein–RNA interactions for Protein: Q61179

Irf9, Interferon regulatory factor 9, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf9Q61179 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Irf9Q61179 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Irf9Q61179 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Irf9Q61179 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Irf9Q61179 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Irf9Q61179 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Irf9Q61179 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Irf9Q61179 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Irf9Q61179 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Irf9Q61179 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC19.87■□□□□ 0.77
Irf9Q61179 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Irf9Q61179 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Irf9Q61179 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Irf9Q61179 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Irf9Q61179 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Irf9Q61179 Gm13036-201ENSMUST00000117799 748 ntBASIC19.87■□□□□ 0.77
Irf9Q61179 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Irf9Q61179 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC19.87■□□□□ 0.77
Irf9Q61179 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC19.87■□□□□ 0.77
Irf9Q61179 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Irf9Q61179 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC19.87■□□□□ 0.77
Irf9Q61179 Haglr-201ENSMUST00000100000 2085 ntBASIC19.87■□□□□ 0.77
Irf9Q61179 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC19.87■□□□□ 0.77
Irf9Q61179 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Irf9Q61179 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Irf9Q61179 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Irf9Q61179 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Irf9Q61179 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
Irf9Q61179 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Irf9Q61179 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Irf9Q61179 Rbfox2-206ENSMUST00000227314 1810 ntBASIC19.86■□□□□ 0.77
Irf9Q61179 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Irf9Q61179 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Irf9Q61179 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Irf9Q61179 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Irf9Q61179 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Irf9Q61179 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Irf9Q61179 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC19.86■□□□□ 0.77
Irf9Q61179 Gm5364-201ENSMUST00000216789 889 ntBASIC19.86■□□□□ 0.77
Irf9Q61179 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Irf9Q61179 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Irf9Q61179 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Irf9Q61179 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Irf9Q61179 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Irf9Q61179 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Irf9Q61179 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Irf9Q61179 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Irf9Q61179 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Irf9Q61179 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Irf9Q61179 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Irf9Q61179 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC19.85■□□□□ 0.77
Irf9Q61179 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Irf9Q61179 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Irf9Q61179 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
Irf9Q61179 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Irf9Q61179 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Irf9Q61179 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC19.85■□□□□ 0.77
Irf9Q61179 Gm5712-201ENSMUST00000199748 1043 ntBASIC19.85■□□□□ 0.77
Irf9Q61179 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC19.85■□□□□ 0.77
Irf9Q61179 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Irf9Q61179 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC19.85■□□□□ 0.77
Irf9Q61179 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Irf9Q61179 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Irf9Q61179 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Irf9Q61179 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC19.85■□□□□ 0.77
Irf9Q61179 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC19.85■□□□□ 0.77
Irf9Q61179 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Irf9Q61179 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Irf9Q61179 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Irf9Q61179 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Irf9Q61179 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC19.85■□□□□ 0.77
Irf9Q61179 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Irf9Q61179 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Irf9Q61179 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Irf9Q61179 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Irf9Q61179 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC19.84■□□□□ 0.77
Irf9Q61179 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Irf9Q61179 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC19.84■□□□□ 0.77
Irf9Q61179 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Irf9Q61179 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Irf9Q61179 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Irf9Q61179 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Irf9Q61179 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Irf9Q61179 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Irf9Q61179 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Irf9Q61179 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Irf9Q61179 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Irf9Q61179 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Irf9Q61179 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Irf9Q61179 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Irf9Q61179 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Irf9Q61179 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC19.84■□□□□ 0.77
Irf9Q61179 Gm6184-201ENSMUST00000120403 1261 ntBASIC19.84■□□□□ 0.77
Irf9Q61179 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC19.84■□□□□ 0.77
Irf9Q61179 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC19.84■□□□□ 0.77
Irf9Q61179 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Irf9Q61179 Gm27628-201ENSMUST00000184911 107 ntBASIC19.84■□□□□ 0.77
Irf9Q61179 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Irf9Q61179 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Irf9Q61179 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms