Protein–RNA interactions for Protein: Q61124

Cln3, Battenin, mousemouse

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cln3Q61124 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cln3Q61124 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC17.49■□□□□ 0.39
Cln3Q61124 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cln3Q61124 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cln3Q61124 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC17.49■□□□□ 0.39
Cln3Q61124 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Cln3Q61124 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC17.49■□□□□ 0.39
Cln3Q61124 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC17.49■□□□□ 0.39
Cln3Q61124 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Cln3Q61124 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Cln3Q61124 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cln3Q61124 Gm10576-201ENSMUST00000191927 825 ntBASIC17.49■□□□□ 0.39
Cln3Q61124 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC17.49■□□□□ 0.39
Cln3Q61124 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
Cln3Q61124 AC122024.2-201ENSMUST00000220086 871 ntBASIC17.49■□□□□ 0.39
Cln3Q61124 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cln3Q61124 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cln3Q61124 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Cln3Q61124 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
Cln3Q61124 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Cln3Q61124 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cln3Q61124 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cln3Q61124 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Cln3Q61124 Gm17271-201ENSMUST00000165535 355 ntBASIC17.48■□□□□ 0.39
Cln3Q61124 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Cln3Q61124 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC17.48■□□□□ 0.39
Cln3Q61124 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC17.48■□□□□ 0.39
Cln3Q61124 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Cln3Q61124 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC17.48■□□□□ 0.39
Cln3Q61124 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cln3Q61124 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cln3Q61124 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Cln3Q61124 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Cln3Q61124 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC17.48■□□□□ 0.39
Cln3Q61124 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cln3Q61124 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cln3Q61124 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cln3Q61124 Gm38318-201ENSMUST00000195769 1706 ntBASIC17.47■□□□□ 0.39
Cln3Q61124 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC17.47■□□□□ 0.39
Cln3Q61124 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC17.47■□□□□ 0.39
Cln3Q61124 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
Cln3Q61124 Gm6257-201ENSMUST00000163864 910 ntBASIC17.47■□□□□ 0.39
Cln3Q61124 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Cln3Q61124 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC17.47■□□□□ 0.39
Cln3Q61124 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC17.47■□□□□ 0.39
Cln3Q61124 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Cln3Q61124 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC17.47■□□□□ 0.39
Cln3Q61124 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Cln3Q61124 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC17.47■□□□□ 0.39
Cln3Q61124 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC17.47■□□□□ 0.39
Cln3Q61124 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Cln3Q61124 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cln3Q61124 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cln3Q61124 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cln3Q61124 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cln3Q61124 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cln3Q61124 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Cln3Q61124 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Cln3Q61124 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cln3Q61124 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cln3Q61124 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cln3Q61124 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cln3Q61124 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cln3Q61124 Gm18489-201ENSMUST00000172565 551 ntBASIC17.46■□□□□ 0.39
Cln3Q61124 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Cln3Q61124 Gm19164-201ENSMUST00000210667 640 ntBASIC17.46■□□□□ 0.39
Cln3Q61124 AC154572.2-201ENSMUST00000225105 997 ntBASIC17.46■□□□□ 0.39
Cln3Q61124 AC124549.3-201ENSMUST00000225541 367 ntBASIC17.46■□□□□ 0.39
Cln3Q61124 AC151836.1-202ENSMUST00000226259 753 ntBASIC17.46■□□□□ 0.39
Cln3Q61124 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Cln3Q61124 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cln3Q61124 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cln3Q61124 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC17.46■□□□□ 0.39
Cln3Q61124 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Cln3Q61124 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cln3Q61124 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Cln3Q61124 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cln3Q61124 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cln3Q61124 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cln3Q61124 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cln3Q61124 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cln3Q61124 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC17.45■□□□□ 0.38
Cln3Q61124 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC17.45■□□□□ 0.38
Cln3Q61124 Gm7787-201ENSMUST00000216858 688 ntBASIC17.45■□□□□ 0.38
Cln3Q61124 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cln3Q61124 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cln3Q61124 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Cln3Q61124 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.45■□□□□ 0.38
Cln3Q61124 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC17.45■□□□□ 0.38
Cln3Q61124 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
Cln3Q61124 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cln3Q61124 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cln3Q61124 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cln3Q61124 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC17.45■□□□□ 0.38
Cln3Q61124 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Cln3Q61124 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Cln3Q61124 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Cln3Q61124 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cln3Q61124 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Cln3Q61124 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms