Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Col12a1Q60847 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Col12a1Q60847 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Col12a1Q60847 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Col12a1Q60847 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Col12a1Q60847 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC15.72■□□□□ 0.11
Col12a1Q60847 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC15.72■□□□□ 0.11
Col12a1Q60847 AL593843.1-201ENSMUST00000195891 145 ntBASIC15.72■□□□□ 0.11
Col12a1Q60847 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC15.72■□□□□ 0.11
Col12a1Q60847 CT030684.1-201ENSMUST00000227292 914 ntBASIC15.72■□□□□ 0.11
Col12a1Q60847 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Col12a1Q60847 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC15.72■□□□□ 0.11
Col12a1Q60847 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Col12a1Q60847 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Col12a1Q60847 Gm15693-201ENSMUST00000120470 637 ntBASIC15.71■□□□□ 0.11
Col12a1Q60847 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Col12a1Q60847 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Col12a1Q60847 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Col12a1Q60847 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC15.71■□□□□ 0.11
Col12a1Q60847 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Col12a1Q60847 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Col12a1Q60847 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC15.71■□□□□ 0.1
Col12a1Q60847 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.1
Col12a1Q60847 Gm5184-201ENSMUST00000220417 1702 ntBASIC15.71■□□□□ 0.1
Col12a1Q60847 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Col12a1Q60847 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Col12a1Q60847 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col12a1Q60847 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col12a1Q60847 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col12a1Q60847 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC15.7■□□□□ 0.1
Col12a1Q60847 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC15.7■□□□□ 0.1
Col12a1Q60847 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col12a1Q60847 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Col12a1Q60847 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col12a1Q60847 Gm9385-201ENSMUST00000117563 472 ntBASIC15.7■□□□□ 0.1
Col12a1Q60847 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC15.7■□□□□ 0.1
Col12a1Q60847 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Col12a1Q60847 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Col12a1Q60847 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Col12a1Q60847 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Col12a1Q60847 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Col12a1Q60847 Mir8102-201ENSMUST00000184148 139 ntBASIC15.69■□□□□ 0.1
Col12a1Q60847 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC15.69■□□□□ 0.1
Col12a1Q60847 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC15.69■□□□□ 0.1
Col12a1Q60847 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Col12a1Q60847 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Col12a1Q60847 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Col12a1Q60847 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Col12a1Q60847 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Col12a1Q60847 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Col12a1Q60847 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Col12a1Q60847 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Col12a1Q60847 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Col12a1Q60847 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC15.69■□□□□ 0.1
Col12a1Q60847 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Col12a1Q60847 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Col12a1Q60847 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Col12a1Q60847 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Col12a1Q60847 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Col12a1Q60847 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC15.68■□□□□ 0.1
Col12a1Q60847 Gm44719-201ENSMUST00000206404 149 ntBASIC15.68■□□□□ 0.1
Col12a1Q60847 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Col12a1Q60847 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Col12a1Q60847 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Col12a1Q60847 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Col12a1Q60847 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Col12a1Q60847 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Col12a1Q60847 Gm15163-201ENSMUST00000120749 1302 ntBASIC15.68■□□□□ 0.1
Col12a1Q60847 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC15.68■□□□□ 0.1
Col12a1Q60847 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Col12a1Q60847 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC15.68■□□□□ 0.1
Col12a1Q60847 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Col12a1Q60847 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC15.68■□□□□ 0.1
Col12a1Q60847 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Col12a1Q60847 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Col12a1Q60847 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Col12a1Q60847 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Col12a1Q60847 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC15.68■□□□□ 0.1
Col12a1Q60847 Gm36967-201ENSMUST00000193814 266 ntBASIC15.68■□□□□ 0.1
Col12a1Q60847 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Col12a1Q60847 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Col12a1Q60847 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col12a1Q60847 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC15.67■□□□□ 0.1
Col12a1Q60847 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col12a1Q60847 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC15.67■□□□□ 0.1
Col12a1Q60847 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col12a1Q60847 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col12a1Q60847 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col12a1Q60847 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col12a1Q60847 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col12a1Q60847 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col12a1Q60847 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col12a1Q60847 Gm13829-201ENSMUST00000119600 138 ntBASIC15.67■□□□□ 0.1
Col12a1Q60847 Gm29541-201ENSMUST00000191351 678 ntBASIC15.67■□□□□ 0.1
Col12a1Q60847 AC154239.3-201ENSMUST00000226933 674 ntBASIC15.67■□□□□ 0.1
Col12a1Q60847 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col12a1Q60847 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Col12a1Q60847 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col12a1Q60847 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col12a1Q60847 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms