Protein–RNA interactions for Protein: Q60596

Xrcc1, DNA repair protein XRCC1, mousemouse

Predictions only

Length 631 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xrcc1Q60596 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Xrcc1Q60596 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Xrcc1Q60596 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Xrcc1Q60596 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Xrcc1Q60596 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Xrcc1Q60596 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
Xrcc1Q60596 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Xrcc1Q60596 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Xrcc1Q60596 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Xrcc1Q60596 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Xrcc1Q60596 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Xrcc1Q60596 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
Xrcc1Q60596 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Xrcc1Q60596 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Xrcc1Q60596 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Xrcc1Q60596 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC15.29■□□□□ 0.04
Xrcc1Q60596 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Xrcc1Q60596 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Xrcc1Q60596 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Xrcc1Q60596 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC15.29■□□□□ 0.04
Xrcc1Q60596 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC15.29■□□□□ 0.04
Xrcc1Q60596 Gm34391-201ENSMUST00000203706 907 ntBASIC15.29■□□□□ 0.04
Xrcc1Q60596 AC127349.1-201ENSMUST00000224590 266 ntBASIC15.29■□□□□ 0.04
Xrcc1Q60596 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Xrcc1Q60596 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Xrcc1Q60596 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Xrcc1Q60596 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Xrcc1Q60596 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Xrcc1Q60596 Gm15743-202ENSMUST00000182690 1901 ntBASIC15.29■□□□□ 0.04
Xrcc1Q60596 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Xrcc1Q60596 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Xrcc1Q60596 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Xrcc1Q60596 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC15.29■□□□□ 0.04
Xrcc1Q60596 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Xrcc1Q60596 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Xrcc1Q60596 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Xrcc1Q60596 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Xrcc1Q60596 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC15.28■□□□□ 0.04
Xrcc1Q60596 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC15.28■□□□□ 0.04
Xrcc1Q60596 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Xrcc1Q60596 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Xrcc1Q60596 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Xrcc1Q60596 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Xrcc1Q60596 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Xrcc1Q60596 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Xrcc1Q60596 Gm7935-201ENSMUST00000100555 1278 ntBASIC15.28■□□□□ 0.04
Xrcc1Q60596 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Xrcc1Q60596 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Xrcc1Q60596 Mir6404-201ENSMUST00000183699 94 ntBASIC15.28■□□□□ 0.04
Xrcc1Q60596 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
Xrcc1Q60596 Umpk-ps-201ENSMUST00000211897 827 ntBASIC15.28■□□□□ 0.04
Xrcc1Q60596 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Xrcc1Q60596 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Xrcc1Q60596 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Xrcc1Q60596 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Xrcc1Q60596 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC15.28■□□□□ 0.04
Xrcc1Q60596 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Xrcc1Q60596 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Xrcc1Q60596 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Xrcc1Q60596 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Xrcc1Q60596 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Xrcc1Q60596 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Xrcc1Q60596 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Xrcc1Q60596 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Xrcc1Q60596 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Xrcc1Q60596 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Xrcc1Q60596 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Xrcc1Q60596 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Xrcc1Q60596 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Xrcc1Q60596 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Xrcc1Q60596 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC15.27■□□□□ 0.04
Xrcc1Q60596 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Xrcc1Q60596 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
Xrcc1Q60596 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC15.27■□□□□ 0.04
Xrcc1Q60596 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC15.27■□□□□ 0.04
Xrcc1Q60596 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC15.27■□□□□ 0.04
Xrcc1Q60596 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Xrcc1Q60596 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Xrcc1Q60596 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Xrcc1Q60596 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Xrcc1Q60596 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Xrcc1Q60596 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Xrcc1Q60596 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Xrcc1Q60596 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Xrcc1Q60596 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Xrcc1Q60596 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Xrcc1Q60596 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
Xrcc1Q60596 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
Xrcc1Q60596 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Xrcc1Q60596 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Xrcc1Q60596 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC15.26■□□□□ 0.03
Xrcc1Q60596 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC15.26■□□□□ 0.03
Xrcc1Q60596 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC15.26■□□□□ 0.03
Xrcc1Q60596 Gm8349-201ENSMUST00000182720 1003 ntBASIC15.26■□□□□ 0.03
Xrcc1Q60596 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Xrcc1Q60596 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Xrcc1Q60596 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Xrcc1Q60596 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC15.26■□□□□ 0.03
Xrcc1Q60596 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Xrcc1Q60596 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms