Protein–RNA interactions for Protein: Q5XFR0

Pabpn1l, Embryonic polyadenylate-binding protein 2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpn1lQ5XFR0 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Pabpn1lQ5XFR0 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pabpn1lQ5XFR0 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pabpn1lQ5XFR0 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pabpn1lQ5XFR0 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Pabpn1lQ5XFR0 Gm42901-201ENSMUST00000197735 3171 ntBASIC16.1■□□□□ 0.17
Pabpn1lQ5XFR0 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Pabpn1lQ5XFR0 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC16.09■□□□□ 0.17
Pabpn1lQ5XFR0 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pabpn1lQ5XFR0 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pabpn1lQ5XFR0 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC16.09■□□□□ 0.17
Pabpn1lQ5XFR0 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pabpn1lQ5XFR0 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC16.09■□□□□ 0.17
Pabpn1lQ5XFR0 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Pabpn1lQ5XFR0 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Pabpn1lQ5XFR0 Gm10138-203ENSMUST00000206952 366 ntBASIC16.09■□□□□ 0.17
Pabpn1lQ5XFR0 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC16.09■□□□□ 0.17
Pabpn1lQ5XFR0 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Pabpn1lQ5XFR0 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pabpn1lQ5XFR0 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pabpn1lQ5XFR0 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC16.09■□□□□ 0.17
Pabpn1lQ5XFR0 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Pabpn1lQ5XFR0 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Pabpn1lQ5XFR0 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC16.09■□□□□ 0.17
Pabpn1lQ5XFR0 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pabpn1lQ5XFR0 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pabpn1lQ5XFR0 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pabpn1lQ5XFR0 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC16.09■□□□□ 0.17
Pabpn1lQ5XFR0 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pabpn1lQ5XFR0 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
Pabpn1lQ5XFR0 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
Pabpn1lQ5XFR0 Gm10584-201ENSMUST00000207036 2628 ntBASIC16.09■□□□□ 0.17
Pabpn1lQ5XFR0 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pabpn1lQ5XFR0 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pabpn1lQ5XFR0 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pabpn1lQ5XFR0 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pabpn1lQ5XFR0 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Pabpn1lQ5XFR0 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Pabpn1lQ5XFR0 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Pabpn1lQ5XFR0 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Pabpn1lQ5XFR0 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
Pabpn1lQ5XFR0 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC16.08■□□□□ 0.17
Pabpn1lQ5XFR0 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pabpn1lQ5XFR0 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pabpn1lQ5XFR0 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Pabpn1lQ5XFR0 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pabpn1lQ5XFR0 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pabpn1lQ5XFR0 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pabpn1lQ5XFR0 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pabpn1lQ5XFR0 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pabpn1lQ5XFR0 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Pabpn1lQ5XFR0 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Pabpn1lQ5XFR0 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC16.08■□□□□ 0.16
Pabpn1lQ5XFR0 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pabpn1lQ5XFR0 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pabpn1lQ5XFR0 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pabpn1lQ5XFR0 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pabpn1lQ5XFR0 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pabpn1lQ5XFR0 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Pabpn1lQ5XFR0 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pabpn1lQ5XFR0 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pabpn1lQ5XFR0 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pabpn1lQ5XFR0 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC16.07■□□□□ 0.16
Pabpn1lQ5XFR0 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC16.07■□□□□ 0.16
Pabpn1lQ5XFR0 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pabpn1lQ5XFR0 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Pabpn1lQ5XFR0 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pabpn1lQ5XFR0 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Pabpn1lQ5XFR0 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Pabpn1lQ5XFR0 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Pabpn1lQ5XFR0 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Pabpn1lQ5XFR0 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pabpn1lQ5XFR0 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pabpn1lQ5XFR0 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC16.06■□□□□ 0.16
Pabpn1lQ5XFR0 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pabpn1lQ5XFR0 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pabpn1lQ5XFR0 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pabpn1lQ5XFR0 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Pabpn1lQ5XFR0 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pabpn1lQ5XFR0 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pabpn1lQ5XFR0 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pabpn1lQ5XFR0 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pabpn1lQ5XFR0 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pabpn1lQ5XFR0 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pabpn1lQ5XFR0 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pabpn1lQ5XFR0 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC16.06■□□□□ 0.16
Pabpn1lQ5XFR0 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Pabpn1lQ5XFR0 Gm27275-201ENSMUST00000184318 272 ntBASIC16.06■□□□□ 0.16
Pabpn1lQ5XFR0 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC16.06■□□□□ 0.16
Pabpn1lQ5XFR0 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pabpn1lQ5XFR0 Mtag2-201ENSMUST00000058665 714 ntBASIC16.06■□□□□ 0.16
Pabpn1lQ5XFR0 Gm10812-201ENSMUST00000099864 546 ntBASIC16.06■□□□□ 0.16
Pabpn1lQ5XFR0 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC16.06■□□□□ 0.16
Pabpn1lQ5XFR0 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Pabpn1lQ5XFR0 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pabpn1lQ5XFR0 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pabpn1lQ5XFR0 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pabpn1lQ5XFR0 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pabpn1lQ5XFR0 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pabpn1lQ5XFR0 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms