Protein–RNA interactions for Protein: Q5U4C3

Scaf1, Splicing factor, arginine/serine-rich 19, mousemouse

Known RBP Predictions only

Length 1,256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf1Q5U4C3 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Scaf1Q5U4C3 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Scaf1Q5U4C3 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Scaf1Q5U4C3 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC20.82■□□□□ 0.92
Scaf1Q5U4C3 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Scaf1Q5U4C3 Gm26308-201ENSMUST00000157768 69 ntBASIC20.82■□□□□ 0.92
Scaf1Q5U4C3 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Scaf1Q5U4C3 Gm45612-201ENSMUST00000211320 160 ntBASIC20.82■□□□□ 0.92
Scaf1Q5U4C3 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Scaf1Q5U4C3 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Scaf1Q5U4C3 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Scaf1Q5U4C3 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Scaf1Q5U4C3 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Scaf1Q5U4C3 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Scaf1Q5U4C3 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Scaf1Q5U4C3 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Scaf1Q5U4C3 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Scaf1Q5U4C3 Gm15920-201ENSMUST00000118998 402 ntBASIC20.81■□□□□ 0.92
Scaf1Q5U4C3 Gm14822-201ENSMUST00000122247 291 ntBASIC20.81■□□□□ 0.92
Scaf1Q5U4C3 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
Scaf1Q5U4C3 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Scaf1Q5U4C3 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Scaf1Q5U4C3 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Scaf1Q5U4C3 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Scaf1Q5U4C3 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Scaf1Q5U4C3 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Scaf1Q5U4C3 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Scaf1Q5U4C3 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Scaf1Q5U4C3 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Scaf1Q5U4C3 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Scaf1Q5U4C3 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC20.8■□□□□ 0.92
Scaf1Q5U4C3 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Scaf1Q5U4C3 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Scaf1Q5U4C3 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC20.8■□□□□ 0.92
Scaf1Q5U4C3 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Scaf1Q5U4C3 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC20.8■□□□□ 0.92
Scaf1Q5U4C3 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC20.8■□□□□ 0.92
Scaf1Q5U4C3 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC20.8■□□□□ 0.92
Scaf1Q5U4C3 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Scaf1Q5U4C3 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Scaf1Q5U4C3 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Scaf1Q5U4C3 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC20.8■□□□□ 0.92
Scaf1Q5U4C3 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Scaf1Q5U4C3 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Scaf1Q5U4C3 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Scaf1Q5U4C3 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Scaf1Q5U4C3 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Scaf1Q5U4C3 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Scaf1Q5U4C3 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Scaf1Q5U4C3 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Scaf1Q5U4C3 Gm27301-201ENSMUST00000184012 127 ntBASIC20.79■□□□□ 0.92
Scaf1Q5U4C3 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC20.79■□□□□ 0.92
Scaf1Q5U4C3 AC122024.2-201ENSMUST00000220086 871 ntBASIC20.79■□□□□ 0.92
Scaf1Q5U4C3 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC20.79■□□□□ 0.92
Scaf1Q5U4C3 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Scaf1Q5U4C3 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Scaf1Q5U4C3 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Scaf1Q5U4C3 Gm9867-201ENSMUST00000192212 2647 ntBASIC20.79■□□□□ 0.92
Scaf1Q5U4C3 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Scaf1Q5U4C3 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Scaf1Q5U4C3 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Scaf1Q5U4C3 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Scaf1Q5U4C3 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC20.78■□□□□ 0.92
Scaf1Q5U4C3 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Scaf1Q5U4C3 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Scaf1Q5U4C3 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Scaf1Q5U4C3 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Scaf1Q5U4C3 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Scaf1Q5U4C3 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Scaf1Q5U4C3 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC20.78■□□□□ 0.92
Scaf1Q5U4C3 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Scaf1Q5U4C3 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Scaf1Q5U4C3 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Scaf1Q5U4C3 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Scaf1Q5U4C3 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Scaf1Q5U4C3 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Scaf1Q5U4C3 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Scaf1Q5U4C3 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Scaf1Q5U4C3 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Scaf1Q5U4C3 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Scaf1Q5U4C3 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Scaf1Q5U4C3 AC157650.3-201ENSMUST00000225058 1476 ntBASIC20.77■□□□□ 0.92
Scaf1Q5U4C3 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC20.77■□□□□ 0.92
Scaf1Q5U4C3 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Scaf1Q5U4C3 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Scaf1Q5U4C3 Gm17271-201ENSMUST00000165535 355 ntBASIC20.77■□□□□ 0.92
Scaf1Q5U4C3 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Scaf1Q5U4C3 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Scaf1Q5U4C3 Gm8396-201ENSMUST00000057361 823 ntBASIC20.77■□□□□ 0.92
Scaf1Q5U4C3 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Scaf1Q5U4C3 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Scaf1Q5U4C3 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Scaf1Q5U4C3 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Scaf1Q5U4C3 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC20.77■□□□□ 0.91
Scaf1Q5U4C3 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Scaf1Q5U4C3 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Scaf1Q5U4C3 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC20.76■□□□□ 0.91
Scaf1Q5U4C3 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Scaf1Q5U4C3 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Scaf1Q5U4C3 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 62.4 ms