Protein–RNA interactions for Protein: Q5R1I4

Trav6-2, T cell receptor alpha variable 6-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-2Q5R1I4 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC14.04□□□□□ -0.16
Trav6-2Q5R1I4 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav6-2Q5R1I4 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav6-2Q5R1I4 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav6-2Q5R1I4 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav6-2Q5R1I4 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Trav6-2Q5R1I4 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav6-2Q5R1I4 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav6-2Q5R1I4 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav6-2Q5R1I4 Gm14494-201ENSMUST00000118786 435 ntBASIC14.04□□□□□ -0.16
Trav6-2Q5R1I4 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Trav6-2Q5R1I4 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC14.04□□□□□ -0.16
Trav6-2Q5R1I4 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav6-2Q5R1I4 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC14.04□□□□□ -0.16
Trav6-2Q5R1I4 Gm27702-201ENSMUST00000184512 56 ntBASIC14.04□□□□□ -0.16
Trav6-2Q5R1I4 Gm45683-201ENSMUST00000210825 1247 ntBASIC14.04□□□□□ -0.16
Trav6-2Q5R1I4 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav6-2Q5R1I4 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav6-2Q5R1I4 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav6-2Q5R1I4 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav6-2Q5R1I4 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav6-2Q5R1I4 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav6-2Q5R1I4 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav6-2Q5R1I4 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC14.04□□□□□ -0.16
Trav6-2Q5R1I4 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav6-2Q5R1I4 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Trav6-2Q5R1I4 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav6-2Q5R1I4 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav6-2Q5R1I4 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav6-2Q5R1I4 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC14.03□□□□□ -0.16
Trav6-2Q5R1I4 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC14.03□□□□□ -0.16
Trav6-2Q5R1I4 AC090659.1-201ENSMUST00000224334 768 ntBASIC14.03□□□□□ -0.16
Trav6-2Q5R1I4 AC159106.1-201ENSMUST00000224421 690 ntBASIC14.03□□□□□ -0.16
Trav6-2Q5R1I4 AC117588.1-201ENSMUST00000228510 999 ntBASIC14.03□□□□□ -0.16
Trav6-2Q5R1I4 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav6-2Q5R1I4 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav6-2Q5R1I4 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC14.03□□□□□ -0.16
Trav6-2Q5R1I4 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trav6-2Q5R1I4 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav6-2Q5R1I4 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav6-2Q5R1I4 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav6-2Q5R1I4 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trav6-2Q5R1I4 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC14.03□□□□□ -0.16
Trav6-2Q5R1I4 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Trav6-2Q5R1I4 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav6-2Q5R1I4 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav6-2Q5R1I4 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav6-2Q5R1I4 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav6-2Q5R1I4 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav6-2Q5R1I4 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Trav6-2Q5R1I4 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Trav6-2Q5R1I4 Gm43338-201ENSMUST00000198617 2223 ntBASIC14.02□□□□□ -0.16
Trav6-2Q5R1I4 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Trav6-2Q5R1I4 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav6-2Q5R1I4 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC14.02□□□□□ -0.16
Trav6-2Q5R1I4 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Trav6-2Q5R1I4 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav6-2Q5R1I4 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Trav6-2Q5R1I4 AC131586.3-201ENSMUST00000228355 1367 ntBASIC14.02□□□□□ -0.17
Trav6-2Q5R1I4 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC14.02□□□□□ -0.17
Trav6-2Q5R1I4 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav6-2Q5R1I4 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC14.02□□□□□ -0.17
Trav6-2Q5R1I4 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC14.02□□□□□ -0.17
Trav6-2Q5R1I4 Gm27646-201ENSMUST00000183989 110 ntBASIC14.02□□□□□ -0.17
Trav6-2Q5R1I4 AC084391.1-201ENSMUST00000200651 141 ntBASIC14.02□□□□□ -0.17
Trav6-2Q5R1I4 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC14.02□□□□□ -0.17
Trav6-2Q5R1I4 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trav6-2Q5R1I4 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC14.02□□□□□ -0.17
Trav6-2Q5R1I4 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav6-2Q5R1I4 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav6-2Q5R1I4 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav6-2Q5R1I4 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Trav6-2Q5R1I4 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav6-2Q5R1I4 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav6-2Q5R1I4 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC14.02□□□□□ -0.17
Trav6-2Q5R1I4 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Trav6-2Q5R1I4 Gm36858-201ENSMUST00000194501 2391 ntBASIC14.02□□□□□ -0.17
Trav6-2Q5R1I4 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Trav6-2Q5R1I4 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Trav6-2Q5R1I4 AC122901.1-201ENSMUST00000214203 1790 ntBASIC14.01□□□□□ -0.17
Trav6-2Q5R1I4 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav6-2Q5R1I4 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trav6-2Q5R1I4 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav6-2Q5R1I4 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trav6-2Q5R1I4 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trav6-2Q5R1I4 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav6-2Q5R1I4 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Trav6-2Q5R1I4 Gm8784-201ENSMUST00000222096 1435 ntBASIC14.01□□□□□ -0.17
Trav6-2Q5R1I4 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trav6-2Q5R1I4 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
Trav6-2Q5R1I4 Gm8344-201ENSMUST00000119813 856 ntBASIC14.01□□□□□ -0.17
Trav6-2Q5R1I4 Gm11764-201ENSMUST00000120221 623 ntBASIC14.01□□□□□ -0.17
Trav6-2Q5R1I4 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC14.01□□□□□ -0.17
Trav6-2Q5R1I4 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC14.01□□□□□ -0.17
Trav6-2Q5R1I4 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC14.01□□□□□ -0.17
Trav6-2Q5R1I4 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav6-2Q5R1I4 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav6-2Q5R1I4 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav6-2Q5R1I4 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC14.01□□□□□ -0.17
Trav6-2Q5R1I4 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms