Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav5d-4Q5R1F6 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC13.8□□□□□ -0.2
Trav5d-4Q5R1F6 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav5d-4Q5R1F6 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav5d-4Q5R1F6 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Trav5d-4Q5R1F6 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav5d-4Q5R1F6 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav5d-4Q5R1F6 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Trav5d-4Q5R1F6 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC13.8□□□□□ -0.2
Trav5d-4Q5R1F6 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav5d-4Q5R1F6 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav5d-4Q5R1F6 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trav5d-4Q5R1F6 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav5d-4Q5R1F6 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav5d-4Q5R1F6 AC121577.1-201ENSMUST00000227302 707 ntBASIC13.8□□□□□ -0.2
Trav5d-4Q5R1F6 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav5d-4Q5R1F6 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav5d-4Q5R1F6 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trav5d-4Q5R1F6 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav5d-4Q5R1F6 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC13.8□□□□□ -0.2
Trav5d-4Q5R1F6 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav5d-4Q5R1F6 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav5d-4Q5R1F6 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav5d-4Q5R1F6 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Trav5d-4Q5R1F6 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav5d-4Q5R1F6 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav5d-4Q5R1F6 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trav5d-4Q5R1F6 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav5d-4Q5R1F6 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav5d-4Q5R1F6 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trav5d-4Q5R1F6 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav5d-4Q5R1F6 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav5d-4Q5R1F6 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav5d-4Q5R1F6 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trav5d-4Q5R1F6 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC13.79□□□□□ -0.2
Trav5d-4Q5R1F6 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC13.79□□□□□ -0.2
Trav5d-4Q5R1F6 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC13.79□□□□□ -0.2
Trav5d-4Q5R1F6 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav5d-4Q5R1F6 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav5d-4Q5R1F6 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav5d-4Q5R1F6 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav5d-4Q5R1F6 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav5d-4Q5R1F6 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav5d-4Q5R1F6 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav5d-4Q5R1F6 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav5d-4Q5R1F6 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC13.79□□□□□ -0.2
Trav5d-4Q5R1F6 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav5d-4Q5R1F6 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav5d-4Q5R1F6 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav5d-4Q5R1F6 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC13.78□□□□□ -0.2
Trav5d-4Q5R1F6 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav5d-4Q5R1F6 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav5d-4Q5R1F6 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav5d-4Q5R1F6 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav5d-4Q5R1F6 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav5d-4Q5R1F6 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav5d-4Q5R1F6 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Trav5d-4Q5R1F6 Gm9013-201ENSMUST00000132939 882 ntBASIC13.78□□□□□ -0.2
Trav5d-4Q5R1F6 Gm10052-201ENSMUST00000168019 960 ntBASIC13.78□□□□□ -0.2
Trav5d-4Q5R1F6 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trav5d-4Q5R1F6 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC13.78□□□□□ -0.2
Trav5d-4Q5R1F6 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
Trav5d-4Q5R1F6 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav5d-4Q5R1F6 Gm7729-201ENSMUST00000050143 801 ntBASIC13.78□□□□□ -0.2
Trav5d-4Q5R1F6 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav5d-4Q5R1F6 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav5d-4Q5R1F6 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trav5d-4Q5R1F6 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav5d-4Q5R1F6 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC13.78□□□□□ -0.2
Trav5d-4Q5R1F6 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav5d-4Q5R1F6 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav5d-4Q5R1F6 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav5d-4Q5R1F6 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav5d-4Q5R1F6 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav5d-4Q5R1F6 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC13.78□□□□□ -0.2
Trav5d-4Q5R1F6 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav5d-4Q5R1F6 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav5d-4Q5R1F6 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trav5d-4Q5R1F6 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trav5d-4Q5R1F6 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Trav5d-4Q5R1F6 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Trav5d-4Q5R1F6 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav5d-4Q5R1F6 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav5d-4Q5R1F6 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav5d-4Q5R1F6 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav5d-4Q5R1F6 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav5d-4Q5R1F6 Gm6623-201ENSMUST00000173570 544 ntBASIC13.77□□□□□ -0.21
Trav5d-4Q5R1F6 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC13.77□□□□□ -0.21
Trav5d-4Q5R1F6 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trav5d-4Q5R1F6 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav5d-4Q5R1F6 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav5d-4Q5R1F6 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav5d-4Q5R1F6 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav5d-4Q5R1F6 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav5d-4Q5R1F6 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav5d-4Q5R1F6 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav5d-4Q5R1F6 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav5d-4Q5R1F6 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav5d-4Q5R1F6 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav5d-4Q5R1F6 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms