Protein–RNA interactions for Protein: Q5NCP0

Rnf43, E3 ubiquitin-protein ligase RNF43, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf43Q5NCP0 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rnf43Q5NCP0 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Rnf43Q5NCP0 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rnf43Q5NCP0 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rnf43Q5NCP0 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rnf43Q5NCP0 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rnf43Q5NCP0 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
Rnf43Q5NCP0 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC16.26■□□□□ 0.19
Rnf43Q5NCP0 Mir3113-201ENSMUST00000175478 76 ntBASIC16.26■□□□□ 0.19
Rnf43Q5NCP0 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC16.26■□□□□ 0.19
Rnf43Q5NCP0 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rnf43Q5NCP0 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC16.26■□□□□ 0.19
Rnf43Q5NCP0 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rnf43Q5NCP0 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Rnf43Q5NCP0 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rnf43Q5NCP0 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rnf43Q5NCP0 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Rnf43Q5NCP0 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rnf43Q5NCP0 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rnf43Q5NCP0 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rnf43Q5NCP0 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rnf43Q5NCP0 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rnf43Q5NCP0 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rnf43Q5NCP0 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rnf43Q5NCP0 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Rnf43Q5NCP0 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Rnf43Q5NCP0 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rnf43Q5NCP0 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Rnf43Q5NCP0 Gm6858-201ENSMUST00000208582 1468 ntBASIC16.25■□□□□ 0.19
Rnf43Q5NCP0 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Rnf43Q5NCP0 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Rnf43Q5NCP0 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rnf43Q5NCP0 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
Rnf43Q5NCP0 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC16.25■□□□□ 0.19
Rnf43Q5NCP0 AC151286.1-201ENSMUST00000198489 145 ntBASIC16.25■□□□□ 0.19
Rnf43Q5NCP0 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Rnf43Q5NCP0 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Rnf43Q5NCP0 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rnf43Q5NCP0 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rnf43Q5NCP0 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rnf43Q5NCP0 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rnf43Q5NCP0 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Rnf43Q5NCP0 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rnf43Q5NCP0 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rnf43Q5NCP0 Gm20628-201ENSMUST00000177363 3215 ntBASIC16.24■□□□□ 0.19
Rnf43Q5NCP0 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rnf43Q5NCP0 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rnf43Q5NCP0 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rnf43Q5NCP0 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rnf43Q5NCP0 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Rnf43Q5NCP0 Gm11873-201ENSMUST00000117877 1304 ntBASIC16.24■□□□□ 0.19
Rnf43Q5NCP0 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rnf43Q5NCP0 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rnf43Q5NCP0 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Rnf43Q5NCP0 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC16.24■□□□□ 0.19
Rnf43Q5NCP0 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rnf43Q5NCP0 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rnf43Q5NCP0 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rnf43Q5NCP0 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
Rnf43Q5NCP0 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rnf43Q5NCP0 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC16.24■□□□□ 0.19
Rnf43Q5NCP0 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rnf43Q5NCP0 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC16.24■□□□□ 0.19
Rnf43Q5NCP0 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Rnf43Q5NCP0 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rnf43Q5NCP0 AC132265.1-201ENSMUST00000219233 1665 ntBASIC16.24■□□□□ 0.19
Rnf43Q5NCP0 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rnf43Q5NCP0 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Rnf43Q5NCP0 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rnf43Q5NCP0 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rnf43Q5NCP0 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rnf43Q5NCP0 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rnf43Q5NCP0 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rnf43Q5NCP0 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
Rnf43Q5NCP0 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC16.23■□□□□ 0.19
Rnf43Q5NCP0 Gm26308-201ENSMUST00000157768 69 ntBASIC16.23■□□□□ 0.19
Rnf43Q5NCP0 Gm27646-201ENSMUST00000183989 110 ntBASIC16.23■□□□□ 0.19
Rnf43Q5NCP0 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC16.23■□□□□ 0.19
Rnf43Q5NCP0 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC16.23■□□□□ 0.19
Rnf43Q5NCP0 Gm18622-201ENSMUST00000219361 595 ntBASIC16.23■□□□□ 0.19
Rnf43Q5NCP0 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Rnf43Q5NCP0 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rnf43Q5NCP0 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Rnf43Q5NCP0 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rnf43Q5NCP0 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Rnf43Q5NCP0 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rnf43Q5NCP0 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rnf43Q5NCP0 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rnf43Q5NCP0 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Rnf43Q5NCP0 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rnf43Q5NCP0 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rnf43Q5NCP0 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rnf43Q5NCP0 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Rnf43Q5NCP0 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rnf43Q5NCP0 Dancr-204ENSMUST00000132389 2347 ntBASIC16.22■□□□□ 0.19
Rnf43Q5NCP0 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC16.22■□□□□ 0.19
Rnf43Q5NCP0 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rnf43Q5NCP0 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC16.22■□□□□ 0.19
Rnf43Q5NCP0 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC16.22■□□□□ 0.19
Rnf43Q5NCP0 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC16.22■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms