Protein–RNA interactions for Protein: Q52KI8

Srrm1, Serine/arginine repetitive matrix protein 1, mousemouse

Known RBP Predictions only

Length 946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm1Q52KI8 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Srrm1Q52KI8 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Srrm1Q52KI8 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Srrm1Q52KI8 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC17.9■□□□□ 0.46
Srrm1Q52KI8 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Srrm1Q52KI8 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Srrm1Q52KI8 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Srrm1Q52KI8 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Srrm1Q52KI8 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Srrm1Q52KI8 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Srrm1Q52KI8 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Srrm1Q52KI8 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Srrm1Q52KI8 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
Srrm1Q52KI8 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Srrm1Q52KI8 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
Srrm1Q52KI8 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC17.89■□□□□ 0.45
Srrm1Q52KI8 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Srrm1Q52KI8 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Srrm1Q52KI8 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Srrm1Q52KI8 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Srrm1Q52KI8 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC17.89■□□□□ 0.45
Srrm1Q52KI8 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC17.89■□□□□ 0.45
Srrm1Q52KI8 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC17.89■□□□□ 0.45
Srrm1Q52KI8 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC17.89■□□□□ 0.45
Srrm1Q52KI8 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Srrm1Q52KI8 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Srrm1Q52KI8 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Srrm1Q52KI8 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Srrm1Q52KI8 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
Srrm1Q52KI8 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Srrm1Q52KI8 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Srrm1Q52KI8 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Srrm1Q52KI8 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Srrm1Q52KI8 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Srrm1Q52KI8 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.89■□□□□ 0.45
Srrm1Q52KI8 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Srrm1Q52KI8 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Srrm1Q52KI8 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Srrm1Q52KI8 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Srrm1Q52KI8 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Srrm1Q52KI8 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Srrm1Q52KI8 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC17.88■□□□□ 0.45
Srrm1Q52KI8 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Srrm1Q52KI8 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Srrm1Q52KI8 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC17.88■□□□□ 0.45
Srrm1Q52KI8 Gm44492-201ENSMUST00000197012 141 ntBASIC17.88■□□□□ 0.45
Srrm1Q52KI8 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
Srrm1Q52KI8 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC17.88■□□□□ 0.45
Srrm1Q52KI8 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Srrm1Q52KI8 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC17.88■□□□□ 0.45
Srrm1Q52KI8 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Srrm1Q52KI8 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Srrm1Q52KI8 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Srrm1Q52KI8 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
Srrm1Q52KI8 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC17.88■□□□□ 0.45
Srrm1Q52KI8 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Srrm1Q52KI8 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Srrm1Q52KI8 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Srrm1Q52KI8 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Srrm1Q52KI8 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
Srrm1Q52KI8 Gm5253-201ENSMUST00000187104 1025 ntBASIC17.87■□□□□ 0.45
Srrm1Q52KI8 Gm17968-201ENSMUST00000194902 784 ntBASIC17.87■□□□□ 0.45
Srrm1Q52KI8 Gm44872-201ENSMUST00000207864 420 ntBASIC17.87■□□□□ 0.45
Srrm1Q52KI8 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC17.87■□□□□ 0.45
Srrm1Q52KI8 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Srrm1Q52KI8 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Srrm1Q52KI8 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Srrm1Q52KI8 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Srrm1Q52KI8 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Srrm1Q52KI8 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Srrm1Q52KI8 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Srrm1Q52KI8 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Srrm1Q52KI8 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Srrm1Q52KI8 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Srrm1Q52KI8 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Srrm1Q52KI8 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC17.87■□□□□ 0.45
Srrm1Q52KI8 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Srrm1Q52KI8 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Srrm1Q52KI8 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Srrm1Q52KI8 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Srrm1Q52KI8 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Srrm1Q52KI8 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Srrm1Q52KI8 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Srrm1Q52KI8 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Srrm1Q52KI8 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Srrm1Q52KI8 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Srrm1Q52KI8 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Srrm1Q52KI8 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC17.86■□□□□ 0.45
Srrm1Q52KI8 Gm36967-201ENSMUST00000193814 266 ntBASIC17.86■□□□□ 0.45
Srrm1Q52KI8 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Srrm1Q52KI8 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Srrm1Q52KI8 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Srrm1Q52KI8 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Srrm1Q52KI8 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Srrm1Q52KI8 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Srrm1Q52KI8 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Srrm1Q52KI8 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC17.85■□□□□ 0.45
Srrm1Q52KI8 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Srrm1Q52KI8 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC17.85■□□□□ 0.45
Srrm1Q52KI8 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms