Protein–RNA interactions for Protein: Q4FZF3

Ddx49, Probable ATP-dependent RNA helicase DDX49, mousemouse

Known RBP Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx49Q4FZF3 Gm11764-201ENSMUST00000120221 623 ntBASIC18.56■□□□□ 0.56
Ddx49Q4FZF3 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Ddx49Q4FZF3 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC18.56■□□□□ 0.56
Ddx49Q4FZF3 Gm44945-201ENSMUST00000206764 1187 ntBASIC18.56■□□□□ 0.56
Ddx49Q4FZF3 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ddx49Q4FZF3 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ddx49Q4FZF3 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ddx49Q4FZF3 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC18.56■□□□□ 0.56
Ddx49Q4FZF3 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ddx49Q4FZF3 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ddx49Q4FZF3 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Ddx49Q4FZF3 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Ddx49Q4FZF3 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Ddx49Q4FZF3 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ddx49Q4FZF3 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ddx49Q4FZF3 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Ddx49Q4FZF3 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ddx49Q4FZF3 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Ddx49Q4FZF3 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ddx49Q4FZF3 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ddx49Q4FZF3 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ddx49Q4FZF3 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Ddx49Q4FZF3 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC18.55■□□□□ 0.56
Ddx49Q4FZF3 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ddx49Q4FZF3 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ddx49Q4FZF3 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ddx49Q4FZF3 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC18.55■□□□□ 0.56
Ddx49Q4FZF3 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ddx49Q4FZF3 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Ddx49Q4FZF3 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC18.55■□□□□ 0.56
Ddx49Q4FZF3 Gm18622-201ENSMUST00000219361 595 ntBASIC18.55■□□□□ 0.56
Ddx49Q4FZF3 AC158982.1-201ENSMUST00000228377 901 ntBASIC18.55■□□□□ 0.56
Ddx49Q4FZF3 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Ddx49Q4FZF3 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ddx49Q4FZF3 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ddx49Q4FZF3 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ddx49Q4FZF3 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ddx49Q4FZF3 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ddx49Q4FZF3 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ddx49Q4FZF3 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ddx49Q4FZF3 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ddx49Q4FZF3 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ddx49Q4FZF3 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ddx49Q4FZF3 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Ddx49Q4FZF3 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ddx49Q4FZF3 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ddx49Q4FZF3 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ddx49Q4FZF3 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ddx49Q4FZF3 Gm14701-201ENSMUST00000117156 348 ntBASIC18.54■□□□□ 0.56
Ddx49Q4FZF3 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC18.54■□□□□ 0.56
Ddx49Q4FZF3 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Ddx49Q4FZF3 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
Ddx49Q4FZF3 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC18.54■□□□□ 0.56
Ddx49Q4FZF3 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Ddx49Q4FZF3 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Ddx49Q4FZF3 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ddx49Q4FZF3 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ddx49Q4FZF3 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Ddx49Q4FZF3 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ddx49Q4FZF3 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Ddx49Q4FZF3 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ddx49Q4FZF3 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ddx49Q4FZF3 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Ddx49Q4FZF3 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ddx49Q4FZF3 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Ddx49Q4FZF3 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ddx49Q4FZF3 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
Ddx49Q4FZF3 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ddx49Q4FZF3 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Ddx49Q4FZF3 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Ddx49Q4FZF3 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ddx49Q4FZF3 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
Ddx49Q4FZF3 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC18.53■□□□□ 0.56
Ddx49Q4FZF3 Gm5253-201ENSMUST00000187104 1025 ntBASIC18.53■□□□□ 0.56
Ddx49Q4FZF3 Gm8969-201ENSMUST00000199694 526 ntBASIC18.53■□□□□ 0.56
Ddx49Q4FZF3 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC18.53■□□□□ 0.56
Ddx49Q4FZF3 AC131709.1-201ENSMUST00000224731 1180 ntBASIC18.53■□□□□ 0.56
Ddx49Q4FZF3 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ddx49Q4FZF3 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ddx49Q4FZF3 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ddx49Q4FZF3 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ddx49Q4FZF3 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Ddx49Q4FZF3 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ddx49Q4FZF3 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ddx49Q4FZF3 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Ddx49Q4FZF3 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Ddx49Q4FZF3 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Ddx49Q4FZF3 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ddx49Q4FZF3 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.56
Ddx49Q4FZF3 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Ddx49Q4FZF3 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC18.52■□□□□ 0.56
Ddx49Q4FZF3 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Ddx49Q4FZF3 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Ddx49Q4FZF3 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC18.52■□□□□ 0.56
Ddx49Q4FZF3 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC18.52■□□□□ 0.56
Ddx49Q4FZF3 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
Ddx49Q4FZF3 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ddx49Q4FZF3 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ddx49Q4FZF3 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ddx49Q4FZF3 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 70.1 ms