Protein–RNA interactions for Protein: Q3USH1

Fam196a, Protein FAM196A, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam196aQ3USH1 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Fam196aQ3USH1 Gm15358-201ENSMUST00000119249 520 ntBASIC16.03■□□□□ 0.16
Fam196aQ3USH1 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC16.03■□□□□ 0.16
Fam196aQ3USH1 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Fam196aQ3USH1 Gm18489-201ENSMUST00000172565 551 ntBASIC16.03■□□□□ 0.16
Fam196aQ3USH1 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Fam196aQ3USH1 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Fam196aQ3USH1 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Fam196aQ3USH1 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Fam196aQ3USH1 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Fam196aQ3USH1 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Fam196aQ3USH1 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Fam196aQ3USH1 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Fam196aQ3USH1 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Fam196aQ3USH1 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Fam196aQ3USH1 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Fam196aQ3USH1 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Fam196aQ3USH1 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Fam196aQ3USH1 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Fam196aQ3USH1 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Fam196aQ3USH1 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Fam196aQ3USH1 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Fam196aQ3USH1 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Fam196aQ3USH1 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Fam196aQ3USH1 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Fam196aQ3USH1 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Fam196aQ3USH1 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Fam196aQ3USH1 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC16.02■□□□□ 0.16
Fam196aQ3USH1 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Fam196aQ3USH1 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Fam196aQ3USH1 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Fam196aQ3USH1 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Fam196aQ3USH1 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Fam196aQ3USH1 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Fam196aQ3USH1 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Fam196aQ3USH1 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Fam196aQ3USH1 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Fam196aQ3USH1 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Fam196aQ3USH1 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Fam196aQ3USH1 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Fam196aQ3USH1 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Fam196aQ3USH1 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC16.01■□□□□ 0.15
Fam196aQ3USH1 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Fam196aQ3USH1 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Fam196aQ3USH1 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Fam196aQ3USH1 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Fam196aQ3USH1 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Fam196aQ3USH1 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Fam196aQ3USH1 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Fam196aQ3USH1 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Fam196aQ3USH1 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Fam196aQ3USH1 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Fam196aQ3USH1 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Fam196aQ3USH1 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Fam196aQ3USH1 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Fam196aQ3USH1 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Fam196aQ3USH1 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Fam196aQ3USH1 AC154767.3-201ENSMUST00000225150 1342 ntBASIC16■□□□□ 0.15
Fam196aQ3USH1 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Fam196aQ3USH1 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Fam196aQ3USH1 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Fam196aQ3USH1 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC16■□□□□ 0.15
Fam196aQ3USH1 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC16■□□□□ 0.15
Fam196aQ3USH1 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC16■□□□□ 0.15
Fam196aQ3USH1 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
Fam196aQ3USH1 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC16■□□□□ 0.15
Fam196aQ3USH1 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Fam196aQ3USH1 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC16■□□□□ 0.15
Fam196aQ3USH1 Gm10253-201ENSMUST00000194270 940 ntBASIC16■□□□□ 0.15
Fam196aQ3USH1 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC16■□□□□ 0.15
Fam196aQ3USH1 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC16■□□□□ 0.15
Fam196aQ3USH1 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC16■□□□□ 0.15
Fam196aQ3USH1 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Fam196aQ3USH1 Gpr146-202ENSMUST00000053120 1040 ntBASIC16■□□□□ 0.15
Fam196aQ3USH1 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC16■□□□□ 0.15
Fam196aQ3USH1 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Fam196aQ3USH1 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Fam196aQ3USH1 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Fam196aQ3USH1 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Fam196aQ3USH1 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Fam196aQ3USH1 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Fam196aQ3USH1 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Fam196aQ3USH1 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Fam196aQ3USH1 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Fam196aQ3USH1 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Fam196aQ3USH1 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Fam196aQ3USH1 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Fam196aQ3USH1 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Fam196aQ3USH1 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Fam196aQ3USH1 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
Fam196aQ3USH1 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Fam196aQ3USH1 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Fam196aQ3USH1 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Fam196aQ3USH1 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Fam196aQ3USH1 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC15.99■□□□□ 0.15
Fam196aQ3USH1 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC15.99■□□□□ 0.15
Fam196aQ3USH1 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Fam196aQ3USH1 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Fam196aQ3USH1 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Fam196aQ3USH1 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms