Protein–RNA interactions for Protein: Q3UMQ8

Naf1, H/ACA ribonucleoprotein complex non-core subunit NAF1, mousemouse

Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Naf1Q3UMQ8 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
Naf1Q3UMQ8 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Naf1Q3UMQ8 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Naf1Q3UMQ8 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Naf1Q3UMQ8 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Naf1Q3UMQ8 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Naf1Q3UMQ8 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC16.24■□□□□ 0.19
Naf1Q3UMQ8 Dancr-204ENSMUST00000132389 2347 ntBASIC16.24■□□□□ 0.19
Naf1Q3UMQ8 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Naf1Q3UMQ8 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC16.24■□□□□ 0.19
Naf1Q3UMQ8 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Naf1Q3UMQ8 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC16.24■□□□□ 0.19
Naf1Q3UMQ8 Gm37584-201ENSMUST00000193595 1290 ntBASIC16.24■□□□□ 0.19
Naf1Q3UMQ8 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Naf1Q3UMQ8 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Naf1Q3UMQ8 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Naf1Q3UMQ8 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Naf1Q3UMQ8 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Naf1Q3UMQ8 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Naf1Q3UMQ8 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Naf1Q3UMQ8 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Naf1Q3UMQ8 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Naf1Q3UMQ8 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Naf1Q3UMQ8 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Naf1Q3UMQ8 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Naf1Q3UMQ8 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Naf1Q3UMQ8 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Naf1Q3UMQ8 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Naf1Q3UMQ8 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Naf1Q3UMQ8 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Naf1Q3UMQ8 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Naf1Q3UMQ8 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Naf1Q3UMQ8 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Naf1Q3UMQ8 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Naf1Q3UMQ8 Gm9172-201ENSMUST00000212092 954 ntBASIC16.23■□□□□ 0.19
Naf1Q3UMQ8 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC16.23■□□□□ 0.19
Naf1Q3UMQ8 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Naf1Q3UMQ8 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC16.23■□□□□ 0.19
Naf1Q3UMQ8 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Naf1Q3UMQ8 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
Naf1Q3UMQ8 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Naf1Q3UMQ8 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Naf1Q3UMQ8 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Naf1Q3UMQ8 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Naf1Q3UMQ8 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Naf1Q3UMQ8 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Naf1Q3UMQ8 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Naf1Q3UMQ8 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Naf1Q3UMQ8 Gm26596-201ENSMUST00000180464 2655 ntBASIC16.22■□□□□ 0.19
Naf1Q3UMQ8 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Naf1Q3UMQ8 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Naf1Q3UMQ8 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Naf1Q3UMQ8 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Naf1Q3UMQ8 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Naf1Q3UMQ8 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Naf1Q3UMQ8 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Naf1Q3UMQ8 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
Naf1Q3UMQ8 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
Naf1Q3UMQ8 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Naf1Q3UMQ8 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Naf1Q3UMQ8 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC16.22■□□□□ 0.19
Naf1Q3UMQ8 Gm11780-201ENSMUST00000136880 516 ntBASIC16.22■□□□□ 0.19
Naf1Q3UMQ8 Gm6443-201ENSMUST00000203599 874 ntBASIC16.22■□□□□ 0.19
Naf1Q3UMQ8 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC16.22■□□□□ 0.19
Naf1Q3UMQ8 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC16.22■□□□□ 0.19
Naf1Q3UMQ8 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Naf1Q3UMQ8 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Naf1Q3UMQ8 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Naf1Q3UMQ8 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Naf1Q3UMQ8 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Naf1Q3UMQ8 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Naf1Q3UMQ8 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC16.22■□□□□ 0.19
Naf1Q3UMQ8 Gm37166-201ENSMUST00000195473 2474 ntBASIC16.22■□□□□ 0.19
Naf1Q3UMQ8 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Naf1Q3UMQ8 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Naf1Q3UMQ8 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Naf1Q3UMQ8 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Naf1Q3UMQ8 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Naf1Q3UMQ8 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Naf1Q3UMQ8 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Naf1Q3UMQ8 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Naf1Q3UMQ8 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Naf1Q3UMQ8 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Naf1Q3UMQ8 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Naf1Q3UMQ8 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Naf1Q3UMQ8 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Naf1Q3UMQ8 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC16.21■□□□□ 0.19
Naf1Q3UMQ8 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC16.21■□□□□ 0.19
Naf1Q3UMQ8 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Naf1Q3UMQ8 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC16.21■□□□□ 0.19
Naf1Q3UMQ8 AC138767.1-201ENSMUST00000222661 415 ntBASIC16.21■□□□□ 0.19
Naf1Q3UMQ8 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Naf1Q3UMQ8 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Naf1Q3UMQ8 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Naf1Q3UMQ8 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Naf1Q3UMQ8 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Naf1Q3UMQ8 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Naf1Q3UMQ8 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Naf1Q3UMQ8 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Naf1Q3UMQ8 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms